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15-4361-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 2818111 [Map]; Strand: c
      • AT5G08660.1 - [+] show detail - Protein of unknown function (DUF668)
        Distance: 92; Region: intergenic
      • AT5G08670.1 - [+] show detail - ATP synthase alpha/beta family protein
        Distance: 6; Region: intergenic
    Flanking Genome Sequence: 15-4361-1 - 5-prime edge 
    NTGAAAAACT AACAAAATCG GTTATACATA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCTC TCTTATGTTA TTTTGATTCA TAGAATGGTG 
    TGCAAGTGGT ATGGTGATCT TCATCATCAT CATTTACCCA TCGCAAGCAG 
    TATAACATCC CATGCCTGAA AATGTATCAC TATATTGAAA TATTGCAAAT 
    GATCTAACAA CATTACGTCA CATTACAGCT TCTTCCATAC CCTTTCTTTT 
    ATGCTCTTAT ATACACAACC AAACATGTAT GAATCAGAAG CCGGTTCTGT 
    GCTTTGGCAG AGACCCTACA AAACACACAA CTCTCCATTA GAAGCTCAAG 
    CTACCTTCTT TTAACAATGC TTTATAATCT CTTGGCACAT CAACCCGATC 
    GATCACATCC AACACTTTTT CCTTGTCAAT AGCAAAGTCA AGAAGCGGAA 
    AACCCGAAGA ATACCGCTTC ACTGCAGCTG ATTTGCTTCT TCTCACTCCA 
    CGAAAATACT CACTGCTTTT GCTCAAAGGG TCACACTTTC TTGCCCGCGA 
    GTACTCAGAA TCAAAATCCT GACTCTTGCT AACACATGGA GTTCTCTTTC 
    TCTTGCTTGC CTCTTGTAAC ATCTTTTGCT CCTCATCTGT TACTATTGGG 
    ACACTGAGTG GTTCANATAT CAATTGCTGG TTCGTAGTAT CCAATGGAGA 
    CTTGATAGAA NAAAGTCTAN GACCTCCTCG AGCGTCGCTC TTAGCTTTTG 
    TAACCAAATG TGGAACCAAA TTATCTGTCN

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 2818163 [Map]; Strand: c
      • AT5G08670.1 - [+] show detail - ATP synthase alpha/beta family protein
        Distance: 0; Region: exon9 (3UTR)
    Flanking Genome Sequence: 15-4361-1 - 3-prime edge 
    GAGACTGGCA TCAAGAAATC TTAAACACAT ATTGCAATTA GAATCTGCAA 
    GATTTTTCAT CTTTATTTCA ACAAAGGAAG CAAAACAACC AAAAATTTGA 
    TTAACAGTGA ATGGATCTGT TCAGTATCAT CTTGCCAGCT CTCATGGAAT 
    TTGAACCAAA AGAAACTATA ATTACGGAAC TCAGATTCCG TTTGGTCGGA 
    GAGTCGCACG CATTGGTTTT TTTTTTTCGT TTTNGCCNGG AAAAAAAANA 
    AAANTTTTAA CCTNNAAAAA TCNNANNNAN TCTTTNANNC NGNNNNCTTT 
    TNACCNATNT TNTTNGCNTT NGNANCCCCC TNNTNNNTCC CTCCANCCTT 
    NTAAAACAAT NGTNNGNAAA NATNNTNNNC NTNNCCTTCC ANCAANCCNN 
    GAANCAANCC CAAAANNATT NNGGNCAGTC CCNCTNCNTA ACCCTTTTNG 
    ATANCANCAA NTNTACCTTN GGCACCTANA TTTANNCTTC CCAAGGGNGT 
    NTNTTTTNNT AAAACCCNGT NGNGGGTCAN NTTCAANNCC NCAANCTTNT 
    TAGGGGACCT TNGAANGNTC CNNNCCGGGG CCGNANCCCC NGGGCCCNTN 
    NA

AT5G08660.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF668)
Computational Description
Protein of unknown function (DUF668); INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF668 (InterPro:IPR007700), Protein of unknown function DUF3475 (InterPro:IPR021864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF668) (TAIR:AT1G34320.1); Has 342 Blast hits to 276 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 2; Plants - 333; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G08670.1

Model type
Protein coding
Short Description
ATP synthase alpha/beta family protein
Curator Summary
Encodes the mitochondrial ATP synthase beta-subunit. This subunit is encoded by a multigene family of three members (At5g08670, At5g08680, At5g08690) that shared 98% sequence identity at the amino acid level.
Computational Description
ATP synthase alpha/beta family protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, copper ion binding, cobalt ion binding, zinc ion binding, ATP binding; INVOLVED IN: response to oxidative stress; LOCATED IN: mitochondrion, plasma membrane, chloroplast, mitochondrial respiratory chain complex I, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); EXPRESSED IN: 8 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATP synthase, F1 beta subunit (InterPro:IPR020971), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR