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15-4226-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 18295406 [Map]; Strand: w
      • AT3G49340.1 - [+] show detail - Cysteine proteinases superfamily protein
        Distance: -829; Region: promoter
    Flanking Genome Sequence: 15-4226-1 - 5-prime edge 
    GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT TTGGATACCT CGTTTAATCA TGTGTTGTCC 
    TATGTTATGT GTTTCATGTG TTACTTGCTT TCCACTTTAA AACAAAAATA 
    TTCTAGTTTC CTTAGATATT TCAAACATGA CAGTTTCCAC NTTCACATTA 
    AAATATTTGG GAAAATTAAA TCTGAAGGAG TTCTACGAAA AAATTTGTCC 
    GTATACACCT TTTTTTGGAG AATGCCAATT TGGACCAAAA TACCCCTACT 
    CGATATTTTA AACATTTTTG AAAAAATTTA ACGTTGATAA CATGTAGATC 
    TACAAAAATA TAATTGATTT GTAAAAAAAA AATNGTTATT TAATTGAAAA 
    AGTNGATTTT TTTATANATA AAGTTTNGTC TAAATTTCTT AAAANACNAT 
    TTCTAATAAT CTACTTAGTT NAAAATTTCT ATTCTAATAT NGGGNACATA 
    TTCTACNANA TTTAAACTAT TTTTNTTTNT AACAATNTTA AAAAATAGGA 
    TNTTCAATAT NTAAAAATNG NCNAACATGT NTTCTAAAAT TTTCTTCATG 
    TNCTAAACTA TGTGNGAAAT TGTNTTCTAA AAATTTNTAT AGTTNCTGAA 
    AACGGNNNAA AACGTTTNCT AAAAAATTTT CACTTTTANA ATTTATATTN 
    TAATCAAATT TAAAATTTNG TTNCTAAACT TTTTAAAATT ACN

AT3G49340.1

Model type
Protein coding
Short Description
Cysteine proteinases superfamily protein
Computational Description
Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT2G27420.1); Has 7805 Blast hits to 7737 proteins in 710 species: Archae - 57; Bacteria - 222; Metazoa - 3269; Fungi - 4; Plants - 1892; Viruses - 135; Other Eukaryotes - 2226 (source: NCBI BLink).
Link
InterPro Scan - TAIR