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15-4089-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22620396 [Map]; Strand: c
      • AT1G61320.1 - [+] show detail - FBD / Leucine Rich Repeat domains containing protein
        Distance: 543; Region: intergenic
      • AT1G61330.1 - [+] show detail - FBD, F-box and Leucine Rich Repeat domains containing protein
        Distance: -2579; Region: intergenic
    Flanking Genome Sequence: 15-4089-1 - 5-prime edge
    TTGGAGATGG TCTTATATAG CAACACATGT GAGTTTTATT CCTCTAAATT 
    TTCTAAGTTA CCAATTGTTT TTTGTTATTT CAACTTTTTA TGTTTCTATC
    TTTCCATTTT CTTTATCCAA ATTTAGTAAA AATAAAAAAA GGCCTAGCTA
    GCTACACTGT ATGGCTCAGT ATCCTCAGAC ACAGAGCTAA TTCGGACTGG
    CGAAAGACCA CTCCATGGTC TTTTATTTTC CTCCGTTTGT TTCTTCAACC
    TACGATCTAC GTACCACCTA TATATGTCGT GAACGCAATG GGAGACGTCA
    CCAATGTGAC TATACACCGG CTGACAATCT CATATCCACC TTTAACAGAG
    TGAACTCCAC CCGCATATCT TCGTCGGACA ATGTTCTTGA GGAGCTGCCA
    TGGAGATGGA ACTTACTATC TAGGCCTTAA TTTTAGGCTA TATTTCATTT
    ATTTAAGCAG CTCTATTGTT AAATGCCTCT TTGTCTAGTA CTTGATTTAC
    TGTTAAAAAA AATTTGATTA ATAAATTTCA CATTTCATAT AAAATAAATT
    GGAAAAAGAG TTCAAACCTG AAATTAAACA AAGTCATAAA CAATAGAATT
    TCAAAATAAG AGTTTTTTTT TTTTTTTTGG GCAAAAAATT TNANNCTNNN
    NAAACNNTTT NNNCCNNNAA AACCAAAAAA AACCCNNNAN NNGGNNANAC
    NTTGNGGTTN NANNNCN

AT1G61320.1

Model type
Protein coding
Short Description
FBD / Leucine Rich Repeat domains containing protein
Computational Description
FBD / Leucine Rich Repeat domains containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566); BEST Arabidopsis thaliana protein match is: FBD, F-box and Leucine Rich Repeat domains containing protein (TAIR:AT1G61330.1); Has 419 Blast hits to 418 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 419; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G61330.1

Model type
Protein coding
Short Description
FBD, F-box and Leucine Rich Repeat domains containing protein
Computational Description
FBD, F-box and Leucine Rich Repeat domains containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566); BEST Arabidopsis thaliana protein match is: FBD / Leucine Rich Repeat domains containing protein (TAIR:AT1G61320.1); Has 1015 Blast hits to 1010 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1009; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR