1. Home
  2. Mutant Lines
  3. 15-3974-1

15-3974-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 10912017 [Map]; Strand: w
      • AT1G30757.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 2233; Region: intergenic
      • AT1G30760.1 - [+] show detail - FAD-binding Berberine family protein
        Distance: -6261; Region: intergenic
    Flanking Genome Sequence: 15-3974-1 - 5-prime edge 
    GNGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCGG CATTTCTAAG ATCAACTCAG TTAATTATCA 
    TTACAATTAG TGTTAATAAT TTTTTATTTT CTTGACATTT ACCTAATTTT 
    CTATGTAAAG CACGTTTCTA CACATTCTAT TGTAGATTTT GTGGTGCGGG 
    TAAGATTCAT AGCAATACCA ACATGAGAAT TAATTACAGT TTCATATATT 
    GTATTGTAAA TTTCTTTTGA ATCAATCGCT AAATTTTTAT AATTCGTCAC 
    TGGTTTGGTC ATAAGTTATT CACAATATGG ACTAGCCGAA GTTATATATA 
    GTTTTAAATT ATATAAATAG GTACAACCGT ATAAGCATAA TAAGCCCATG 
    AAATGAGTCT AGCTCTCTCT CTATATACAT GTATACATAC ACGCATAAGA 
    CCACCCCATC AAAACTTGGA AGTGCATCAA TTGGATGGTA TAAAACGGAC 
    GTCGTTTATT TGTTTTTGAG CTTTTGAATG CTTTCTCTGT TTGCGCATTA 
    ACCGGCGAAA TTTCTCAATG CTAATTACAC TTCCCATTGA ACGAAATAAA 
    ATAAATTAGT TTAAGATTAA ATAATACACA CCCAAATTCC AGAAGATAAA 
    ACATCTACGT ACACGGGTCA ATTAGATTAA TTGGACATTC TTACATATGT 
    ATTGACGGAT CTAAACAAGA AAANGNGGGN GATNACCANC CCGGGCCGNN 
    GACCACCGGC CCCNANA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 10911960 [Map]; Strand: w
      • AT1G30757.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 2176; Region: intergenic
      • AT1G30760.1 - [+] show detail - FAD-binding Berberine family protein
        Distance: -6318; Region: intergenic
    Flanking Genome Sequence: 15-3974-1 - 3-prime edge 
    CAAGAGTACG GTTAAACATA TATATATATA AATATAACAC GTTATTTAGA 
    TC

AT1G30757.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G30760.1

Model type
Protein coding
Short Description
FAD-binding Berberine family protein
Computational Description
FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem, root, flower, pedicel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT2G34790.1); Has 5139 Blast hits to 5066 proteins in 829 species: Archae - 62; Bacteria - 2468; Metazoa - 28; Fungi - 1653; Plants - 688; Viruses - 0; Other Eukaryotes - 240 (source: NCBI BLink).
Link
InterPro Scan - TAIR