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15-3574-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 5440331 [Map]; Strand: w
      • AT4G08540.1 - [+] show detail - DNA-directed RNA polymerase II protein
        Distance: 3807; Region: intergenic
      • AT4G08550.1 - [+] show detail - electron carriers;protein disulfide oxidoreductases
        Distance: -4014; Region: intergenic
    Flanking Genome Sequence: 15-3574-1 - 3-prime edge 
    ATTAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCA 
    GTGGAGAAAA AAGTGATAAA GATTGCTTGT TAAAGAAATA AATAGACACA 
    GAAATTGGTA ACCGAGTTCA CGGCCTCAAC CGCTACGTCT CGGGGGAGAT 
    CTAGCTTCAC TATATCAAAG GGATTACAAA CACCACTTGA CTTGTGATGT 
    TGTTTTGGTT TCAGGTACAA TCTCAAGAAG AACAAAGATC AAAGATAAAG 
    AACAAAGAAG GAGAAAGCT

AT4G08540.1

Model type
Protein coding
Short Description
DNA-directed RNA polymerase II protein
Computational Description
DNA-directed RNA polymerase II protein; BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase II protein (TAIR:AT1G77890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G08550.1

Model type
Protein coding
Short Description
electron carriers;protein disulfide oxidoreductases
Computational Description
electron carriers;protein disulfide oxidoreductases; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336), Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: glutaredoxin-related (TAIR:AT3G11920.1); Has 5684 Blast hits to 4425 proteins in 725 species: Archae - 19; Bacteria - 1130; Metazoa - 1053; Fungi - 285; Plants - 562; Viruses - 105; Other Eukaryotes - 2530 (source: NCBI BLink).
Link
InterPro Scan - TAIR