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15-3515-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 6097500 [Map]; Strand: w
      • AT3G17820.1 - [+] show detail - glutamine synthetase 1.3
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 15-3515-1 - 5-prime edge 
    CTCTCAGGAG AGAAGTTGTA TTGATCAGTC TTCTCTTTCC CTAAACACAC 
    TGATTATTTT CTCTCCGACG CCGCCATGTC TCTGCTCTCA GATCTCGTTA 
    ACCTCAACCT CACCGATGCC ACCGGGAAAA TCATCGCCGA ATACATATGG 
    TTCGATCTCG CTTCTCTCTG TTTCACTTTA ACCACAAGTG TCATGTATCG 
    TTCTTTCTTC ATATTGCTGC GATCCAAAAG TTTATCTCTT TTGTTATATT 
    GATCTTTTTG CGAGTTTGGG TATGAACATG ATTCATTTCA TGGAGTGTTT 
    CGTTGTCCTG CTTTGAATTA ATACGTGTGT TAAAAACATA AAGCT

AT3G17820.1

Model type
Protein coding
Short Description
glutamine synthetase 1.3
Curator Summary
encodes a cytosolic glutamine synthetase, the enzyme has low affinity with substrate ammonium
Computational Description
glutamine synthetase 1.3 (GLN1.3); FUNCTIONS IN: glutamate-ammonia ligase activity, copper ion binding; INVOLVED IN: in 6 processes; LOCATED IN: cytosol, cytosolic ribosome, chloroplast, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746); BEST Arabidopsis thaliana protein match is: glutamine synthase clone R1 (TAIR:AT5G37600.1); Has 10255 Blast hits to 10251 proteins in 3319 species: Archae - 147; Bacteria - 5273; Metazoa - 413; Fungi - 249; Plants - 1750; Viruses - 3; Other Eukaryotes - 2420 (source: NCBI BLink).
Link
InterPro Scan - TAIR