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15-3205-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 8387567 [Map]; Strand: w
      • AT3G23420.1 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: -243; Region: promoter
      • AT3G23430.1 - [+] show detail - phosphate 1
        Distance: 0; Region: exon15 (3UTR)
    Flanking Genome Sequence: 15-3205-1 - 5-prime edge 
    GNGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCAT AACGCAAATC AAAATTTACA TAAACCAATA 
    TATGAAATTA AAATTGTCTT CTTCGTTTTG CACTTTGGAG CGTTTAACAG 
    TTGTAGAATC CATTAGTCTC CCATAATTAA TATGTTTAAG GATAAATGGT 
    TAGGCAATTT CGGGAGTTTC CCAAAGGTTT TTCTCCGATA TGACTACATC 
    GATGCAAAAT CCGAAATGCT TCCTCTAAAT ACTTGAAACT TGGTTCGATC 
    CTTAAACCCT CCAAATCTTT GTTTAACCGT CTGAGTCCCT GTCAAGGAAC 
    GGTAACGGTA CGGTCTTCAC TGCCCTAAAT TGGCCGACAT TGTTTAAGTG 
    CTCATTCTCC ACTCTGTAAA TACCGAAAGA AAGATTCATG TTCAATAACA 
    TCCAAAATCA AGTTTTAATA AACCTAGGTG AAGTTTTTTT ATTTACCTGT 
    AAAAGTTCCA GTGGCCTCGA CGAATGACTT CAAGTGACGC CAAGAAGAAA 
    TCTAGCAAAT GAGACTGAAC AGGACTGACC CTGAATCTCA TAATTGNCTC 
    GATCCAAGCA ACTCGCAACA CCAAATTCAA CGCCTGAACA ACTCAACATT 
    TAGTCGAAGA TCATAAATTG GTGAAACACG CTATAGTTAG TTATGTAATT 
    GGGCTTACAA TGGGANAGGT AGTAGAAGTT TCTTGNTTCC CGGAAAACCA 
    AATTGGNCCN TAACCATGGA TTTTCCATTT AGGGTTAAAA NA

AT3G23420.1

Model type
Protein coding
Short Description
F-box and associated interaction domains-containing protein
Computational Description
F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT3G24580.1); Has 994 Blast hits to 945 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 994; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G23430.1

Model type
Protein coding
Short Description
phosphate 1
Curator Summary
mutant is deficient in the transfer of phosphate from root epidermal and cortical cells to the xylem. encodes protein with the mainly hydrophilic N-terminal and the C-terminal containing 6 potential membrane-spanning domains.
Computational Description
phosphate 1 (PHO1); INVOLVED IN: cellular response to phosphate starvation, phosphate transport; LOCATED IN: integral to membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: EXS, C-terminal (InterPro:IPR004342), SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: EXS (ERD1/XPR1/SYG1) family protein (TAIR:AT1G68740.1); Has 1217 Blast hits to 1145 proteins in 207 species: Archae - 2; Bacteria - 0; Metazoa - 255; Fungi - 408; Plants - 406; Viruses - 0; Other Eukaryotes - 146 (source: NCBI BLink).
Link
InterPro Scan - TAIR