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15-2650-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2945239 [Map]; Strand: w
      • AT3G09590.1 - [+] show detail - CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 ...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-2650-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TGCCTGAATG TATCATACTG CAATCGGACT TACGTTGTTT AGCCCATTTA 
    TCAGCGAATC GGGCCAGGTC TCTGTCCCAT CCGAGCGTTG GCACGCCTGA 
    AGAAACACGT GCATCGTTGT GCGCTTGTAG AAATTCTCTC GACAGTTTTG 
    CTCTTCTCGC TCTGTTTACC AAACGCGCCG CCGTGTTCAC CGCGTCGGGG 
    ATGGAGGTTC CGAGGACGGA GGGATGACCG GAAAAGAGAA GGAAGAGAAG 
    AAGAAGACAT GATGATGGAT GAGACAACGT TACAGACATC TCCACGTCTC 
    TGTATAATTT TGTCTCTCAT CATGATTCCT CTGTTTCTAA GGGAGTTTTT 
    TTTGTTACTT TTGTTCAGTT AGAGATTTTT CCATTTTCTG ACATTTTAAC 
    AAATTTTCCT GATTCTGTTG TTTCATATCA AACAATTCTT ATTGGTGATG 
    ATGAGAAAAC TACCGTATAT TTTTAGATTA AAAAAACGAA ATTATTAAGG 
    TTGTTATACT TTTCACAACC CANCAAAAGA TAAAAAGAAA AACAATTTCC 
    GTCAACAGCA GGATTCGAAC CTGCGCGGGC AAAGCCCAAT TGATTTCGAG 
    TCAATCTCCT TAACCCTNGG ACATATTGAC TTTTGCTCAT TGNTNCTACT 
    ATATTATATA TATACTCANA TNTTATNANN NCCAAATTAN CAANCNAAAN 
    TAAAAGCTNC NANNCNGGCC NNNNANCACN CGNNCCCNTA A

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2945230 [Map]; Strand: w
      • AT3G09590.1 - [+] show detail - CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 ...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-2650-1 - 5-prime edge 
    CNGGATAAAA CTAACAAAAT CGGTTATACG ATAACGGTCG GTACGGGATT 
    TTCCCATCCT ACTTTCATCA AGACATTCAG GTGGGCCTTA CGGTGAGAAC 
    ATTTTCTGGC ACCGGCGTAA GAAGACGTGG TCGCCGGAGA AAGTGGTGAC 
    GAGATGGTTT GAGGAAAGGT TTAACTACGA CGTGAAAACA AACACNGTGC 
    GCACCNGGGA AAGATGTGCN GGCCATTACA CGCAGATGGT GTGGAGAGAG 
    ACCACAGCCG TTGGATGCGC ACGTGTGAAA TGCCATAACG GTCGTGGCTA 
    TCTTGTGGTG TGTGAATATG ATCCACGCGG GAATTACCGA AGGTGAAAGA 
    CCATTTTGAT CAAAACAGTT AAAATGAAAA AATTGTTAGA GATTCAAAAT 
    ATTTTTTCTT CTTCTAAAGT AATGAAGATG GTATATTATT CTTGGTCCTT 
    ACATATATAC AGCCATGTAT TGAAGAGGTA TAAATTCAAA TGGTTCGGAA 
    TCTTTTAATT TTACTATATT AAAGATCAAT AATAAAAAAA AACGTCGACA 
    GCAGGGTTCG AACCTGCNCG GGCGAAGCCC AATAGATTTC AAGTNTATCT 
    CCTTAACCAC TCGGACATAT CGACTTGTTG TTTTNGTTTC GTAAGATTTG 
    AATAAAAACC GAATT

AT3G09590.1

Model type
Protein coding
Short Description
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Computational Description
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein (TAIR:AT5G02730.1); Has 3024 Blast hits to 2931 proteins in 377 species: Archae - 0; Bacteria - 64; Metazoa - 1633; Fungi - 327; Plants - 888; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink).
Link
InterPro Scan - TAIR