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15-2384-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5168003 [Map]; Strand: c
      • AT1G14990.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: intron1 (CDS)
      • AT1G14990.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: intron1 (CDS)
      • AT1G15000.1 - [+] show detail - serine carboxypeptidase-like 50
        Distance: -593; Region: promoter
    Flanking Genome Sequence: 15-2384-1 - 5-prime edge 
    CTGCTTCACT GCTGCCCTCA CATTCTTCTA TACAAACAAC ACGTAATGTC 
    TTTCGTCCGA TCTCAGTTTG CTTCTTTTGG TTGTTCTTTC TTTTCAATAT 
    CGGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5168079 [Map]; Strand: c
      • AT1G14990.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (CDS)
      • AT1G14990.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (CDS)
      • AT1G15000.1 - [+] show detail - serine carboxypeptidase-like 50
        Distance: -517; Region: promoter
    Flanking Genome Sequence: 15-2384-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    NAATCCGGCG TAAGAGACAG CCCGTCGTAG CTTCTGGATC TTTATAACCT 
    CTGAGCAAAC ATCCAAGATC ATCATCTTCA CACCTTCNGA AACTCTTTCA 
    GGTATTATAT CGAACACCTT GTGATCACTT TACCAAACAG AGATGACGAG 
    TAGAAGAAGC ATCTCACGAA ATTTGCAATT GACAAATTGT AAACGCCTTG 
    TATTGTCCAA CTTTTTATGG GCCTATCTGA CCTTTTTCTC TTTTCGGCCC 
    AATAAAACTT TTAGATTTTA TTTCTTTTGG CAACAATAAA TTTAAAATAA 
    TATACATTAT GGAAAATCAT CTACAAACAA AAACCTTTAA ATTAAAAAAC 
    TCACATGTTA ATGCAATTAG GTTAGTAAGC AAGCACGTCT TGACAAAAAT 
    GTTATTGTTA CACATTTAAA AATTCACATG TTATACANGA CAAAACATAA 
    ACGTAATGTT TTGCAGTCAA ATANTGAAAT AAATGAAATA ATACAAAGGG 
    ATCTTTATGT AAAGGCGTCA CCAATTAGTG GAAATAATGG AGCAAGCCAC 
    CTACACTCTT CATATNGCTT TCCACTCTCC TCCTNGCCGA CTTNCGTTGA 
    GTNTNCTNAG GCACCGGTAT TTCCCGANGA AACTCTNCCC ACTAAATTTG 
    GCTACCTCCC NGGTTAACCC CGCNCCCCGG NTCGNCCATG TTCTATGCCT 
    NNNCNAAGGC CCAAAAGCCA ANCAANCCTG TNGC

AT1G14990.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 34 Blast hits to 34 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G14990.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages.
Link
InterPro Scan - TAIR

AT1G15000.1

Model type
Protein coding
Short Description
serine carboxypeptidase-like 50
Computational Description
serine carboxypeptidase-like 50 (scpl50); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 47 (TAIR:AT5G22980.1); Has 3616 Blast hits to 3489 proteins in 407 species: Archae - 0; Bacteria - 288; Metazoa - 703; Fungi - 860; Plants - 1378; Viruses - 0; Other Eukaryotes - 387 (source: NCBI BLink).
Link
InterPro Scan - TAIR