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15-1948-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26752723 [Map]; Strand: c
      • AT5G67020.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 1474; Region: intergenic
      • AT5G67030.1 - [+] show detail - zeaxanthin epoxidase (ZEP) (ABA1)
        Distance: 787; Region: intergenic
    Flanking Genome Sequence: 15-1948-1 - 3-prime edge 
    GATCGGNGNA TNNGCACTAT NTGAATTGTG ATGTCACATT TTGTATATNT 
    ACACNAAATC ATTCAATAAT ATATATGCAC ACATACATTA TCTAAGCCAT 
    TAATATTGTT CCTCCGATCA CGTGGGAATC CCACCGCCCA TCACGTGCCT 
    TCCCCAACCG TCTGATTTTC TTCACGAGAG AAGTCCAAAA AGAGCAACGC 
    AAATAATTGT AAACAANAAA AATCATAAAG AAGAAAACTC ATGCAAAAAC 
    CACATGAATG TACCATCGCA ATTTAATAAC AACCACATGC ATCGTCTTTA 
    GAGAAGATGC ATAAAATCAC AGCCGTTGAT CACGTACAAA GTACGATCGT 
    ATAGGCCGCG GCGCAGGAGA TCGAATGAGC CAAGAAATAT CAACTGTGTA 
    TTTTGATCGA AAGGCTTGGT CGGNCGATTC AATGTTTTGC AATTATTAAA 
    GTAAATCTGA GCAGCGCGAG ACTGTGCTCT CTTGTGGCGG AGCTAGGTTA 
    CGAAGGCGCC GGAAAATTGG ATC

AT5G67020.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G67030.1

Model type
Protein coding
Short Description
zeaxanthin epoxidase (ZEP) (ABA1)
Curator Summary
Encodes a single copy zeaxanthin epoxidase gene that functions in first step of the biosynthesis of the abiotic stress hormone abscisic acid (ABA). Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do.
Computational Description
ABA DEFICIENT 1 (ABA1); FUNCTIONS IN: zeaxanthin epoxidase activity; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Zeaxanthin epoxidase (InterPro:IPR017079), Monooxygenase, FAD-binding (InterPro:IPR002938), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT2G35660.1); Has 6841 Blast hits to 6837 proteins in 1107 species: Archae - 14; Bacteria - 3761; Metazoa - 2; Fungi - 1599; Plants - 605; Viruses - 0; Other Eukaryotes - 860 (source: NCBI BLink).
Link
InterPro Scan - TAIR