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15-1878-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7940548 [Map]; Strand: w
      • AT1G22490.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 15-1878-1 - 5-prime edge 
    CCTCTAAGGG CATTTNTTAG CCGGAGATTG NTGANAAGAA AAATTCAGAA 
    TTATGGAAAA AATAACGAAA GATTGAGAAA CCGAGAGAGG GAGAGAGAAG 
    GAGAGAAAAC AAAATTTAGA CANGAAGTGT TTGTCGCTCT CCTTTTTGTC 
    TCGAGGGGGA AATAAAGGCA AAAGGGTTAA GCCCACTAAA GGAAACTAAG 
    CATGGTATTA GTTATATGAA GATTTTTTGT AAATTGATTT ACAAAATATT 
    AAATTCTCAA GAACTCACCG GCATGGAGGA AGAATAGGAG AGTGAATCTT 
    CAACAAAAAT AAATATACAA AAGAAAGATA TGAGAGTGAA AACCGAAATA 
    TGAGGATCAA ACAAAGTGGT GTGATTTATT TAAAAAGGGA ATTGAGAGAA 
    GCT

AT1G22490.1

Model type
Protein coding
Short Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G72210.1); Has 1544 Blast hits to 1534 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi - 34; Plants - 1460; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link
InterPro Scan - TAIR