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15-1744-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17144124 [Map]; Strand: w
      • AT4G36220.1 - [+] show detail - ferulic acid 5-hydroxylase 1
        Distance: -4489; Region: intergenic
      • AT4G36230.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -1462; Region: intergenic
    Flanking Genome Sequence: 15-1744-1 - 5-prime edge
    GNGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCAT CTTTACATAA TTGCCATTAA ATATAAATAA
    CGATTATAAT CTGATTAATT GAATAATAAT GAAACGACCA AAAAGAGTAA
    ATAATGGAAA AAAATAATGG AATATGGATT TGGGCCTATC AGTTACGTCT
    CGGTGCGTTT GTGGTTTCCG TCACTTCACT CGTCTCCATC GTTTTTTTCT
    TGTCAATTTC AACAGAGTTC TCGTGTAAAT GTTTTCACAT TTACAGTCTC
    CTGTTTTTGC TCTTCGTACG AACTTTATTA GACATATATT GATCTTTATT
    TATTTTTCGA TTAACTCTTT TATCCAAAAA AAATCGGATA ATTGATGAAC
    TCGGCATAGA TAAATCATAA AACTACACCT TGTTTTTTTT TTTTTTTTTT
    TTGGNNAAAA AAAAANNCCC CCCCNGAAAA ANNNNTTTTT TNNNAAAAAA
    ANNCCNANNC CCCCCAANNN AANANCCGGG GGNNGNANNN NACCNNNNNN
    NNTNNAAA

AT4G36220.1

Model type
Protein coding
Short Description
ferulic acid 5-hydroxylase 1
Curator Summary
encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.
Computational Description
ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G36230.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, hypocotyl, flower; EXPRESSED DURING: petal differentiation and expansion stage; Has 250444 Blast hits to 52918 proteins in 2611 species: Archae - 614; Bacteria - 68464; Metazoa - 90603; Fungi - 16312; Plants - 24752; Viruses - 3701; Other Eukaryotes - 45998 (source: NCBI BLink).
Link
InterPro Scan - TAIR