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15-1173-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 6921135 [Map]; Strand: c
      • AT3G19895.1 - [+] show detail - RING/U-box superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-1173-1 - 5-prime edge 
    CCGGCAGGGC TCGTCTCCGA TTACGCCTTC AAACTATAAC GCCGCCGTTT 
    CAATTGCTTC TGATGTACCT ACTGGTTTAA CCAAGTCTCC TTTATCTCAC 
    GCGATTCCAG TTTCGCCGAT TTCTGCTTGC TTACCCTTCC GGTGATCCTA 
    TTTTGATGAT GTCTGGGACT CCTCTCGCTA GGGTTCGATT ATCTGAAATT 
    TTGCCTTATG AAGGAGCTCC TTCTCCGGTG TATGCAAAAG CTGTGGAGGC 
    TTTGTCTGTG TCTTTGATGA GGTATAATGC GTCTGTGATC GAGATAGGGA 
    GTGAAGACAC TGCACTGATG CGATGTGGCC TTGAAGCTGC TCGTTTGTAT 
    TTTAGAACTA GAAGCCTTAC TGTTTCTGGT AAAGGCAATC GTGGCCTCTC 
    TATGTATAGA GCCGGAAGGT TAGCTCTTTT GCGACATTTT TGTTCTCTGG 
    TTTTGGTTTT TGTAGAAAGA ATTGGTTTTG CGTTTTTGAA TTTGAGAAAT 
    TGGTTTGATT TTAGTTACTA TAGCAGNTCT TGATCTATAT GATGTGTAGN 
    GACTGATTTT TGNCTTGTGA ACAGGTCTGN TGAANATTTA AATNCTTNAC 
    CTNCNTGCAT GGNTGANATT TTNANGTGTN TGGGGNNAAG NANCNACNAN 
    CTGNTNTNTN NTGNAATANN AANGCATNNA CNTNTNANAA NNNNANNNNG 
    ANGGNNATGA NG

AT3G19895.1

Model type
Protein coding
Short Description
RING/U-box superfamily protein
Computational Description
RING/U-box superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G12940.1); Has 120 Blast hits to 120 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 108; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
Link
InterPro Scan - TAIR