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15-1124-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 412763 [Map]; Strand: w
      • AT5G02090.1 - [+] show detail - unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; ...
        Distance: -65; Region: promoter
      • AT5G02100.1 - [+] show detail - Oxysterol-binding family protein
        Distance: -757; Region: promoter
    Flanking Genome Sequence: 15-1124-1 - 3-prime edge 
    CTCTCAAGAA CATTATTTAC CGTCACGTTT AAGCATACGT GGCAACATAA 
    GCATCACGCC ACGTCACTAT CGCAACCCTC TTCCCTCTTA TATTATACAC 
    CAGAAGCCCT CTCTCGCATT GATCAAATCA CAAAACCACA AAAAAAAAAA 
    TNTCNTCAAA NGGAAAAAAA AAAANGTTTT TTANGGNTNG CANAAATTNA 
    AAAAAAAAAG GGGGGGTTNG ATNCCNTTTT NGNCCAAANC CNTNGTTTTN 
    TTTAAAAAAA ANGGAAGCTC CCACCCNGGG CCGNNAACCN CCCNNGCCNT 
    NNAA

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 412879 [Map]; Strand: w
      • AT5G02090.1 - [+] show detail - unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; ...
        Distance: -181; Region: promoter
      • AT5G02100.1 - [+] show detail - Oxysterol-binding family protein
        Distance: -641; Region: promoter
    Flanking Genome Sequence: 15-1124-1 - 5-prime edge 
    CTTGAGAGGA TATGCATCNG AAAGATAAAT TAAATAAAGA TGTNTTTTAT 
    GAGACGATAG ATAATATGTG AAAGGGAAGT CTCAACTTAC ATAAAGAAAT 
    CTTCATCTTC TCAAGCAATC TTGAGTTTAA CATTTTTATA TAAATGAAAG 
    TATCCTCACA AACAAATTTG TTTTGGTATA TGAAAAGAGT CTCTACTCAA 
    AAATTGAATA ACAAATTCTC GTATGAAGTA TAAAATAATT CATTAAAAAT 
    TCATTCGTAT CAAATTACCC ACCGCACTAT CCTCAAAATC TTGAATGAAG 
    TCATAGTTTA CATCATAGAT TGGGAAAAGT TTGATCCCAT AGTCATTTTA 
    TTTTATATAT TATCCAAAAA GATTAGTTAA AATGATATAA TTATAAAAAT 
    TTGACTTCAA TACAGATATA ATTGGCTCTC TCACTCAAGA AGCAATGACA 
    ATACTTTCTT AGTTTTGAAG ATCGTGTTAG GTGAGGGAAA ATAAGAACAA 
    ACACATATAT AGCCGTTAAA ATTGAACATA ATTCTATTTT GGGCCGTTAT 
    ATAAAGCCCA ACATGTAGAA TGTCAGCTTA TATTGGGCCT CACGTGGTTT 
    ATGTCGACAT CTTCTCAAAT CTGCTTGCTT TTCAAATATC AAGGAATCCG 
    GTTTGGGTTC GGGTAATGCT TCAATTTTTC NAATGTGATA TANG

AT5G02090.1

Model type
Protein coding
Computational Description
unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G02100.1

Model type
Protein coding
Short Description
Oxysterol-binding family protein
Curator Summary
Encodes a protein that binds to beta-sitosterol and localizes to the ER. The WFDE motif in ORP3a appears to be important for a direct interaction with PVA12 [Plant VAMP-Associated protein 12]. Mutation of this motif causes ORP3a to relocalize to the Golgi and cytosol. The interaction between PVA12 and ORP3a does not appear to be sterol-dependent.
Computational Description
UNFERTILIZED EMBRYO SAC 18 (UNE18); CONTAINS InterPro DOMAIN/s: Oxysterol-binding protein, conserved site (InterPro:IPR018494), Oxysterol-binding protein (InterPro:IPR000648); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 3B (TAIR:AT3G09300.1); Has 2336 Blast hits to 2302 proteins in 216 species: Archae - 0; Bacteria - 0; Metazoa - 1125; Fungi - 658; Plants - 280; Viruses - 0; Other Eukaryotes - 273 (source: NCBI BLink).
Link
InterPro Scan - TAIR