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15-0438-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7531660 [Map]; Strand: w
      • AT1G21500.1 - [+] show detail - unknown protein; Has 29 Blast hits to 29 proteins in 12 species: Archae - 0; ...
        Distance: -635; Region: promoter
      • AT1G21510.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-ter...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-0438-1 - 5-prime edge 
    ATTGGAACCA CTGGNNCCCT ATCTTTNGTG ATTACTTCTC TGATAATTGT 
    TTGGTCGATC TTAGAACTTA TGCGATGTAT TCGAGGCTCT GATCTGTTGC 
    TCATATGACA AATCTTGCGA CCAGACAGAT CTAAACTATC TTTCCTTACA 
    CAAGAAGAGA CCGTCAAACT AGCCGCGGCT ACACCAAATC TCCGGCTTGG 
    AGATGGTGAT TTCAAGAAAT TTCCCTCATA TCTTCTGCTT GGAGATGGAG 
    ATTTCAAGTA CTTTCCCTTG GTTAAGGAGT TTGATGAAGA AGAGATAACA 
    ACTCTTTCTT GATCTTGACG AAAGCTCTTT TGTCGTGTCA ATGAACGATG 
    GTTTGGTGAT AGCTCTCGAG TTCTCTTAGA ACAATTTGAT CCTCTTTTAA 
    AATCTTCATT NGCTCTGTTT GGNGTNGNNG AATTACCANN NNGGGNCGNC 
    NNCCNCNCCN GCACCCNNNN NNNAAAAAAA AAAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3529630 [Map]; Strand: c
      • AT3G11270.2 - [+] show detail - Mov34/MPN/PAD-1 family protein
        Distance: 0; Region: exon2 (CDS)
      • AT3G11270.1 - [+] show detail - Mov34/MPN/PAD-1 family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 15-0438-1 - 3-prime edge 
    GTTCCAATAT TTGAAGAAGT TGGCAATCCT TTGATTGATT TGGATTGCTT 
    TATCTTTCTT TAAGGAGAAA CATTTGATTT TTATTATTGT TTCTGTTGAA 
    GATGTGTTTG TGTAAACAGA TATGTTGTGT AATTGTTTGA GACAATTCCC 
    ACTTTCTTTT GTTTATTGTA GGTTTGTGAT GATCAAGTAG ATCATAACTC 
    TCATACTTAA CTTTTTTTTT CAAAGTCTAC TTTTTATCTG TATGCTTTTG 
    AAATATTTNG GATTGAATAC AGCTNCGGGA GCTTAATTAT TGCCATGTTT 
    TTTTATTTTT AAATTATACT TTCTGTACAA ACGTTTTAAA GCATTCACAA 
    TCTATCTCTC CTCTCTTGCT ANACCTTATT TCTGTATTAC TTCGGTTTTA 
    ATCTTAGTTT CTGGNGTNGC AGCTACGTTC CAAATCCAGN GTNGGTCATT 
    ATNGATGTCC AACCTAAANA ACTNGGAATC CCCACAAAAN CNTACTATGC 
    GGTTGAGGAG GNGAAAGAGG TAAATACCAG CCAATTTTCT AACCATTTTA 
    CTTGCTCGAC TGTTAAGTTG CATCTGACAT ACTTGATTTA CTTTCTGCAT 
    TAGTTATATC CATATATCTA ATTGCCTTGA TCCGAACTTC TCTNTNTGCA 
    NAATGCTACC CAAAAAAGCC ACCAGGTTTT TGTCCNCGGC CCACANAAAT 
    TGCAGCTCAT GAAGTTGAGG AATTGNTTGT CTCATGGGGA AACAACCCCT 
    TNATNGTTGA

AT1G21500.1

Model type
Protein coding
Computational Description
unknown protein; Has 29 Blast hits to 29 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G21510.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: cotyledon; Has 380 Blast hits to 286 proteins in 63 species: Archae - 0; Bacteria - 6; Metazoa - 254; Fungi - 44; Plants - 13; Viruses - 5; Other Eukaryotes - 58 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G11270.1

Model type
Protein coding
Short Description
Mov34/MPN/PAD-1 family protein
Computational Description
maternal effect embryo arrest 34 (MEE34); CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: RP non-ATPase subunit 8A (TAIR:AT5G05780.1); Has 1383 Blast hits to 1379 proteins in 243 species: Archae - 0; Bacteria - 0; Metazoa - 560; Fungi - 337; Plants - 281; Viruses - 0; Other Eukaryotes - 205 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G11270.2

Model type
Protein coding
Short Description
Mov34/MPN/PAD-1 family protein
Computational Description
maternal effect embryo arrest 34 (MEE34); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein catabolic process, ubiquitin-dependent protein catabolic process, embryo development ending in seed dormancy; LOCATED IN: proteasome complex, nucleus, proteasome regulatory particle, lid subcomplex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: RP non-ATPase subunit 8A (TAIR:AT5G05780.2).
Link
InterPro Scan - TAIR