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15-0307-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25586537 [Map]; Strand: w
      • AT5G63930.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 38; Region: intergenic
      • AT5G63940.1 - [+] show detail - Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
        Distance: -1538; Region: intergenic
    Flanking Genome Sequence: 15-0307-1 - 3-prime edge 
    TTTGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC 
    CTGCCANTAT NATAAGGTGA CNNTCCCANT TTTACATGTN CNTGTGTGNC 
    GTNTGTNNNT GNCTCTCTNT CTCGTNCNCC NTGACTGTCN NGAATAAGTN 
    TCCAGTNNTN CCNCAAGNAA CTACTCTTTA CAAGTGTNCA TCNANGGAGG 
    NNGAAACATN ACTAANTCTT AAAATCANGA TCCTCTGGGT CGAAATCTGC 
    GGCNGGTGAA TNACNNTCCC GGGCCGTGAA ANCCNCTTGC CCCTATAGAT 
    GGCCTCGCAA CTGGAGACAC ACTTGTGCAA AGAAGTGCAA TCTTTAACAC 
    AGTGAGCATA TGAGAGACAA TTCTCTCGTC TTCTAGCGNT AACCGAGCNT 
    CANGAACTCC TGAGGACAAN GCATCTCTTC TTATGTAACN CCTNACCCAA 
    TTCACCACAT NTCCTCCTTG ANCNANNAGG NTGACCCGGG GCTNTNNCGG 
    GNNNCNNCNN CANTNNAACC ACCCNCNNNG CNANANAATG NNANACTAGN 
    CNGTNANATN TNAGNGNGNA TGGNTNNTNC TGAGAAAGNG NNTAGNAAAA 
    GNATAAGNTC NAGAGNGCCN NNNTGGTTAN TAANCNNGNC GNNCACAAAT 
    AGCNAAANNT TAGGNGNNAG AGCNAGGTNT GCNANGAGNC CCNNCGNNNC 
    CANACGCNGN NNNNGTGCAN AGNGCAGNTN NTATNACCTN NCCGNTANAC 
    NGAAACACNN GCGANANNNN ANNTAANGNN GNNTNGNNNN CNNAGNNGAA 
    TTNCNNGTNN G

AT5G63930.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT2G33170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G63940.1

Model type
Protein coding
Short Description
Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
Computational Description
Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT1G21590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR