1. Home
  2. Mutant Lines
  3. 15-0252-1

15-0252-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5332815 [Map]; Strand: w
      • AT1G15520.1 - [+] show detail - pleiotropic drug resistance 12
        Distance: 0; Region: exon20 (CDS)
    Flanking Genome Sequence: 15-0252-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCTA 
    TGTACACAGC TGTTCTCTTC CTCGGATTAC AAAACGCAGC TTCAGTGCAA 
    CCAGTCGTCA ACGTCGAAAG AACTGTCTTT TACCGAGAAC AAGCCGCCGG 
    AATGTACTCC GCCATGCCTT ATGCTTTCGC TCAGGTACTT CAAAAAAACA 
    TCATAGAGAG TGAAATTTAC GATTTTTCGT TGCGGAAACC TCAAATTCAA 
    ACTTCGATTT GTTCCAGGTT TTCATCGAGA TCCCATACGT TCTCGTGCAA 
    GCGATAGTGT ACGGTCTCAT AGTGTACGCT ATGATAGGAT TCGAGTGGAC 
    GGCGGTGAAG TTCTTCTGGT ACCTCTTCTT TATGTACGGA TCATTCTTAA 
    CTTTCACCTT CTACGGAATG ATGGCTGTAG CTATGACGCC TAACCACCAC 
    ATCGCCTCCG TCGTCTCCTC CGCTTTCTAC GGCATCTGGA ATCTCTTCTC 
    CGGCTTCCTC ATCCCTCGTC CCGTAAGTAC CAACCTTATT ATTGTTTAAT 
    TTCAAAATGA GCCAAAACTT ATTGAAATAT TAAATATTGA CCCCTAAACG 
    TTTATACGAA AACAGAGTAT GCCTGGNGTG GNGGGGAATG GGNACTACTG 
    GGCTTTGCCC ANNTGCNTGG GCNTTNGNNT GGNTAANNNN NNNNCANNNN 
    NNGNNNNTTT NNNNAACCNN NNNGG

AT1G15520.1

Model type
Protein coding
Short Description
pleiotropic drug resistance 12
Curator Summary
ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots.
Computational Description
pleiotropic drug resistance 12 (PDR12); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 11 (TAIR:AT1G66950.1); Has 377983 Blast hits to 279992 proteins in 3946 species: Archae - 7615; Bacteria - 304057; Metazoa - 8776; Fungi - 6428; Plants - 5794; Viruses - 2; Other Eukaryotes - 45311 (source: NCBI BLink).
Link
InterPro Scan - TAIR