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13-5644-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 494816 [Map]; Strand: w
      • AT2G02060.1 - [+] show detail - Homeodomain-like superfamily protein
        Distance: -754; Region: promoter
    Flanking Genome Sequence: 13-5644-1 - 5-prime edge 
    CCCAAATCCC TATAAGGTAA ATATTATGTG TTCTTACAAA ATTTGGTTTT 
    TCTATGACAA GTATATTCTT TTGACCAGCT AAGCTAACAA ATGTATGTTC 
    AATTGGTTAT ATATCGATCG GGGCAAGGGT AATACTCGAA TCTATGTTCT 
    TTTCATGCAA GTTATGTATG TAGCCTTGTG TAGTTCTCTG GTACGTTTAT 
    ATGCAATGAT TCTCTCGAAA ACTATTAAAA AAAACTATTT AAGATAATAA 
    TGAATGGGGT CACGAGTCAA GACTAATGTA ACCAAAGTCA AATGGATTTT 
    CGTATGATTA CTACAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 494700 [Map]; Strand: w
      • AT2G02060.1 - [+] show detail - Homeodomain-like superfamily protein
        Distance: -870; Region: promoter
    Flanking Genome Sequence: 13-5644-1 - 3-prime edge 
    GATTTGGGAT TTACCCAAAT GAAGAAGTTT CCTCCACNGT ACCTCAAACT 
    TTACTTTCTC ACTTTTTTTC ACGATAGGTT TTAGACCAAA ACGAATAAAT 
    TTAAATGAAA ATAGCCCAAC TGCTTAGCTT TGACCATATA GCATAATTAT 
    TATTCCTATT TTTGTTTTTT GTTTTGTTTT TTTAGGGNNG NGNGTTAAAC 
    TTTCTGATTT CAAATAAATC ACACAATTTT ACAATGGTCC TTCGTTATGT 
    CTTTTGGACC ACCGTTTTGA CTTCATTCCC CTAATTCCTT TACATTTTCT 
    CCCATTTCCC ATTCATTTTC CTTCTTATTG TTTTCTTTTT CACTCCCATA 
    ATAAGTGATA ATAAATCTTA GGATAATATT TATAACAAGA ATTATTTATT 
    TTCCCCATTT TTCTTTTTCT CATTGCTGAT TTGGTGTACA TGGAAGACNA 
    ACCAAAACCA TCATGTCCCT ATATGGTAGC CGACAATAAT TACTGATTTC 
    NCCAGTTTTT TCCAACCATG GATTCAATAT TTTAATCAAC GAATNGNGGA 
    CATAAATNAC GTNANTTTAT CANCTNTTNT ACTATNAACT ACTTATNTTA 
    ANCATNNAAT ACTGNNNNNA ANGANGGNNG GNTNNNTNGN NNGAAATNNN 
    NC

AT2G02060.1

Model type
Protein coding
Short Description
Homeodomain-like superfamily protein
Computational Description
Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G14600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR