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13-5183-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22613562 [Map]; Strand: c
      • AT1G61310.1 - [+] show detail - LRR and NB-ARC domains-containing disease resistance protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-5183-1 - 5-prime edge 
    GCTCCAAATC TTGTTCAGCT AGGCATTTCA GATTCAAGAG AAGTGGGAGA 
    AATAATAAAC AAAGAGAAAG CAACCAATCT TACAAGTATT ACACCATTTC 
    TGAAACTAGA AAGGTTGGGT TTGTATGATT TGCCGAAGCT GGAGAGTATC 
    TACTGGAGTC CTCTCACCTT TCCGCTTTTG TTGACCATAC ATGTTCAAGA 
    CTGTCCAAAG CTGAGAAAGC T

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22613660 [Map]; Strand: c
      • AT1G61310.1 - [+] show detail - LRR and NB-ARC domains-containing disease resistance protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-5183-1 - 3-prime edge 
    TTTGGAGCAA ACAATATCCA AGTCAGATCC TTCATGCTAT GGCACTTCAC 
    TATATCCAGT CGTGAGAGGT TGGTAAAGCA TGGAATTTTC GGATTGATGT 
    GTAAATAAGA CGAGGCCGTC TCGCTTTCTC TGCACTTTAT ATTAATCTCC 
    GAGAAATTAC TATTTTCTCT GCAATTCACT ATATCCAGTC GTGAGAGATT 
    CTCCATACTC GCCAGGAATG ATAAATCGAA TGGCTTTTGA AGAAACTCGT 
    CAATACAAAG ATTAGAGATT ACCTTCGCCA ACCTTTGATC CAAACTAATT 
    AACTCCGCGG ATACAGTTAT GCCTAAATCT TGTAGATTCT CCAATTGCTG 
    CAGCTCCTTC AATACGCTAG CATCTCCATG AACTTTAGAC CCTAGCAGGC 
    TCAACACTCT TAAACTCAAC AACCTTGATA TCCCACTGAT ACTACAAAGT 
    CGCATAGTAT AAGCCAAATT CAGAAAAGTT AGCTTTTTCA ACTCTTTGAG 
    ACCAACAGGC AGTTGCTCTA TTCTTGTAAA CGACAAGTCA AGATACTGCA 
    ACGAGACCAG CCCCNATATC TGCTCTGGAA GTTCATTGAA GTCACTATTA 
    TCTGAAAGAT CCAAAACAAC TANCTTTTGC ATNTACCGAA TGAATTACCA 
    NNNCGGGCCG NNNACACNCG TNNCNNAAA

AT1G61310.1

Model type
Protein coding
Short Description
LRR and NB-ARC domains-containing disease resistance protein
Computational Description
LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, apoptosis, defense response; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT1G61180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR