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Mutant Lines
13-4829-1

13-4829-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 509583 [Map]; Strand: w
- AT2G02070.1 - [+] show detail - indeterminate(ID)-domain 5
  Distance: 158; Region: intergenic
- AT2G02080.1 - [+] show detail - indeterminate(ID)-domain 4
  Distance: 8576; Region: intergenic

TCAATGCTTA GTCTTTGTTC TTGTATGTAT TATTTCTTAT AGGGTCAAAG 
GCTAAAAACA ACATTATACT AACGGGTTTA ACTATAAAAA ATTTGGGTGT 
GAATAATTGT TTTTGATAGG AAAAAAATGT TTTTTTATAT TTGTTTTTGG 
CTGACACATT TATCGTCTTA TCATTGCATG GGGCAGTCAA TGAGTTGGAG 
AGTACAAGCA GCCTTTGCTA AGTTTTTATT TGTCTTTTTG TTTTCATTTT 
CTTTTATTTG CCTTTTTATT CTTTAATTTC TTTTCATTTG TCATCTTCAC 
TAGCTGGCAA TGTCACGAGT GTTTGTCCTG TGATCTCCTT TCTAAATATC 
TCGATACATG TATACATATA CATGTCACAT AGGTGTCACA TGTGCATATA 
TTTATGCATT TGTATAGTTC TGTATGTAAC ATGTTCCTAC CATATCCTCA 
AAGGATTGTC CCCATCATAT TTTAAATTGG ACGGTCCAAA ATAAACAATT 
NTGTCTCAAC ATTCACGCGT CTTCATTATT GATGCTAATN GCGGNNAAAA 
GTTGNANCAT CANTNGAAAC TGNNTNTAAG GNNCAATNNC NATTTTTGNN 
TGGANNNNNG NNTNTNTTNN ANNNCNTNNN AANNAC

3 prime edge [+] show sequence

Chromosome: 2; Position: 509496 [Map]; Strand: w
- AT2G02070.1 - [+] show detail - indeterminate(ID)-domain 5
  Distance: 71; Region: intergenic
- AT2G02080.1 - [+] show detail - indeterminate(ID)-domain 4
  Distance: 8663; Region: intergenic

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATATA 
AGCCAGAAAT ATATTGAATT TCTTAAAGTA TCTAATATGT CACAAGGCAA 
GAAGAAAAAA ATCTACGGAT AATAATATGA AAATTTCTTC ATTGTGAAAC 
CATAAACTAT AACTCTGAAA TTTGTTTTTT TCAGGAGGGA ATCCATTTTA 
TATAAACAAT GAAAGGCAAA ATCTTTTACA AAAGAAAAAA AAAAAAAACC 
CGGGNTTNAA ANAANTGGCN CCNAAANTTT NANTNCCTNN AANGGGGGTT 
TNNANNNCNN CTNCCNNCCC NNAAAAANNT ACCTNGNCCT TNNNNAANCN 
AAAACCCTTT TTAAAANTTN CCCCTNAAAA NCTTTTTTTT TNTTTTNAAA 
ACCCCCCNNN NGGGNTCCCN NAGGGGGGGN AANNCCTNNC NGNCCCCCCC 
CNGGTTTNNN NNTNNNNNCG GNTTTTTTNN NGGNANNCCN NCAANAACCC 
ACCNTTTTNT TNNCTNTTCC CATNTGGTGG TGGTGGTGGT CCCNNCNGNN 
CCNGNNGNNC CNGNNNNAAA ANCCCNCCGT TNCCNCTNTN NNTTTTNANA 
ATNNGCCCAC CCCNAAAAAN GCCTNNANCC NNCCCCNGTN GGNNCCCCTA 
ANNCNTTNNT NCCCNCCNCC NCCAACCCAA ANGGAAAANN NNCCCNNNNA 
NCNTTCCCCN NNNCCCNGGG NTNAAAAAAA AANTNNNNNN NGGGGCNNNN 
NCCCCGN

AT2G02070.1

Model type: Protein coding
Short Description: indeterminate(ID)-domain 5
Computational Description: indeterminate(ID)-domain 5 (IDD5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 4 (TAIR:AT2G02080.1); Has 61158 Blast hits to 25844 proteins in 587 species: Archae - 8; Bacteria - 480; Metazoa - 52168; Fungi - 1154; Plants - 982; Viruses - 10; Other Eukaryotes - 6356 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G02080.1

Model type: Protein coding
Short Description: indeterminate(ID)-domain 4
Computational Description: indeterminate(ID)-domain 4 (IDD4); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT1G14580.2); Has 51298 Blast hits to 20221 proteins in 333 species: Archae - 2; Bacteria - 165; Metazoa - 48118; Fungi - 358; Plants - 855; Viruses - 7; Other Eukaryotes - 1793 (source: NCBI BLink).
Link: InterPro Scan - TAIR