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13-4796-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3670705 [Map]; Strand: w
      • AT1G10980.1 - [+] show detail - Lung seven transmembrane receptor family protein
        Distance: -803; Region: promoter
      • AT1G10990.1 - [+] show detail - unknown protein; Has 4 Blast hits to 4 proteins in 1 species: Archae - 0; Bac...
        Distance: 0; Region: exon2 (CDS)
      • AT1G10990.2 - [+] show detail - unknown protein; Has 6 Blast hits to 6 proteins in 2 species: Archae - 0; Bac...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-4796-1 - 5-prime edge 
    TGATNNNNTC CNAAATCCGT CTTCCATNAC NGTCGGTACG GGATTTTCCC 
    ATCCTACGGT GGTGGGCCTA GCAGCGCAGG TGTCAAGTCA GGTTCATTGG 
    ACGCCACAAG ACTGTACTGT TGAGATTCTT GAGCGTATAG CCGTGGCTGA 
    CCTAGCGGCG GCGCAGGTGT TAAGTTAGGT TTAGTGGACG CCACAGGACC 
    ACATTCTCGA GCCTTTGGAA GCGCGGATGG TGGCGGCGAG TTAGTTTTGG 
    TGGAGCCCTT TCTATAGCCT ATATATGGAT TACATCAAAA GATAAACAGA 
    AGCAAGGAAA TCTATGTTAC ACCAAAAGTA AGATAAAAGG AACTCACGTC 
    GTATGATCCA AATAACCAGA AATGTTGCTC CGGCTATGAA ACCTGGCATC 
    ACTAAAACCG GCATCTTCTC GTCTTTTTTT TTACCATGTT TCATTTCTCT 
    GTTATTCATT TTTGACTTGA TCTTTTGGGG ATCGCCANAC CANATCTAGT 
    GATGGATGAT TCTATANAAA CTGTATAGNG CAAGTTTAAT TTTATCATTT 
    GAATGAAAAG AANAAGAAAA AAACAATTGT TTATGACATG TGTGTGACAA 
    CTGGCAAGTC TTATTTAAAA GTCAATACCA ACGGCGGNAA TAATTAATAC 
    CTGGTTACTT AAATCCTTAA ATTATATTTT TCTTAATGCC ATAATTGACC 
    GAGTCTATCA ATGACATTGT TATCNTANCT CAAANCAAAT TNGATAACTT 
    NTTANTTNCG NAGTTGACAT AAATA

AT1G10980.1

Model type
Protein coding
Short Description
Lung seven transmembrane receptor family protein
Computational Description
Lung seven transmembrane receptor family protein; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT1G61670.1); Has 670 Blast hits to 669 proteins in 172 species: Archae - 0; Bacteria - 0; Metazoa - 291; Fungi - 146; Plants - 175; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G10990.1

Model type
Protein coding
Computational Description
unknown protein; Has 4 Blast hits to 4 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G10990.2

Model type
Protein coding
Computational Description
unknown protein; Has 6 Blast hits to 6 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR