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13-4275-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 19472573 [Map]; Strand: w
      • AT1G52290.1 - [+] show detail - Protein kinase superfamily protein
        Distance: -124; Region: promoter
    Flanking Genome Sequence: 13-4275-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATTGAC TCAGTTAACA CTTACCAACC ATCAAAAGAA 
    GAACTAATAA AGAGCCAAAT TCATCTTATG TTTTTTATTT AAAAATATAA 
    TCATTAAGTC AACATTTTTA AAATAATAAA ATTTACTAAT GATTTTTAGA 
    ATCTTTAAGA AAAATTTACC ATATAAGTCA ACTTTTTTGC TTTTTTTTTT 
    TTTTTTAAAA TTNAAANTTT TTNNNCCCNA NTTTTTTTTN NGNTNGGGGG 
    GGNCCNGNCC CANNNGGGAA AANAAAANCT TTTTTTNNGG GGGNAAANCC 
    CCCCTTTTTT TNNGGGGGGG NNNNTTTTNN NNNAAAANCN GNCCCCCCCA 
    AAAAAAANNG GNNNGGNAAA TTTTNNTTNN NCCCCNTTTT TTNGNAAAAA 
    AAAAAAAAAA AAAAGGGGGG GGGGNAAAAN NNNNNNTTTT TTNCCCNNAA 
    AAAAGNGGNN TTNAAAAAAN CCCCNNNGGG GNNNAAAATT TTNNAANNNN 
    NTTTTNGGGG GGGGGNTNAA AAAAAAANTT TTTNAAAANN AAAAAAAAAA 
    ANTTTTNGGG GGNNAAANTT TTTTTNGGGG GNNGGNNAAA AANTTNNANA 
    ANNNTTTTNN NNNNCCCGGG GGGNAAAANC CNCCCCCCCC CCNGNGNNNN 
    NNCCCCCCGN GGGGGGGGGG NNNNTTTTTT TTTGGNNTTN AAAANAAAAA 
    A

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 19472526 [Map]; Strand: w
      • AT1G52290.1 - [+] show detail - Protein kinase superfamily protein
        Distance: -77; Region: promoter
    Flanking Genome Sequence: 13-4275-1 - 3-prime edge 
    TAACTGACTA ACTGAGAAAC AGAGTGACGA GAGAATTAAA GAGACACTTG 
    CCAGAAGAAC AAATCTCTCA AGTGGGACGG GACCCACCGC ATGTCCCTTT 
    CTTCATTCTC CTTCGTCTTC GTCTTCTTCG TCTTCGTCTT CGTCTTCACT 
    TCCGCCATGA GAAAAACCTG CACACACGCC TGAAAAACCA AATCATCCTC 
    ATCATCTTCT GATCTAATGT CTACCGACAC TATCCCTTCC CTCTCATCTC 
    CACCGGCGCC GGAGTTTCCT TCCACCACAC CAGACACGGC GACGTCACCA 
    GCTCCGTCTC AGCCATCCAT CATCGGACCT TCTTCGTTGG CTCCGTTCCC 
    GGAGACAACA ACAAACATTG ATGGAGGCTC GAGAAATGTA GCATTAACTG 
    GACTTATTAC TGGAGTAGTT CTCGGAGCTA CGTTTGTCCT ACTCGGAGTT 
    TGTATCTTTG TCTGTTTCTA TAAAAGAAAG AAGAGGAAGT TAAAGAAGAA 
    GAAGAAAGAA GATATCGAAG CT

AT1G52290.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: proline extensin-like receptor kinase 1 (TAIR:AT3G24550.1); Has 117666 Blast hits to 116327 proteins in 4415 species: Archae - 105; Bacteria - 14380; Metazoa - 43397; Fungi - 9805; Plants - 32502; Viruses - 416; Other Eukaryotes - 17061 (source: NCBI BLink).
Link
InterPro Scan - TAIR