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13-3458-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3786498 [Map]; Strand: c
      • AT1G11270.2 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: 0; Region: exon2 (CDS)
      • AT1G11270.3 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: 0; Region: exon2 (CDS)
      • AT1G11270.1 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 13-3458-1 - 3-prime edge
    ACTGGGACTC GATTGTGGAT TTCCACTGGT TGGATACGCA CTTGAATCTC 
    AGCAGAGACT CCACAGGAAG TCTCTCGAGG ATGAGCCCAA CAACATCGTG
    TGGTAGCAGC AATTTCACCA CACTAGAGCA ATGTCTTTTC AAAGCCAAAC
    TGGAGCCATC TCTCTCTCTT TCCGATCCAA CAACACTCGA GCAATCTCTT
    TTCAACATTG TCTTCTTGTC TCTATCTCTC TAATTGATTG ATCAACAGAC
    AATTTATATA TATATATATA TATANACACA CACACGAGNN GNGCTNAGAG
    AAATNAAAAC ACACACTCNC CGAANATNNT TATANATANA TNATACANGG
    GGAGAAGNCC CTCNNGANGN GANGAAATCA NANNCTCGAG AGNCCNATNT
    NTANNTCTNT ACCCNNAAAA CNNTNTTTTA TATNNTATAN GAGCGTANAT
    GTNTANNCTC TCNCNGGGGG NAGAGAGANG CAGATATNAT CTNATGNGAC
    NCTCAAAACN TGTTAGAGNT ATACNNGCAN TCTCTGTGCA NCCCTCTCTT
    TTTNGGGNGC TNNCAACNCA CAATTNTTTT TNTGTGACAN ATAAAAAAAA
    AAAGTNCANA CACGCCGCCC CCAAAAAAAA NATAAAANAC CCCNTGNNTC
    NTGANNTGNT TNAAAAAAAA AAAAGNGGGG GGNAANTTTT TTTCCCCCAA
    AAAAAAANNT CCCCAAAAAG GGN

AT1G11270.1

Model type
Protein coding
Short Description
F-box and associated interaction domains-containing protein
Computational Description
F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT2G34280.1); Has 1191 Blast hits to 1176 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1189; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G11270.2

Model type
Protein coding
Short Description
F-box and associated interaction domains-containing protein
Computational Description
F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT2G34280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G11270.3

Model type
Protein coding
Short Description
F-box and associated interaction domains-containing protein
Computational Description
F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT2G34280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR