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13-3363-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26734217 [Map]; Strand: c
      • AT1G70910.1 - [+] show detail - RING/U-box superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-3363-1 - 5-prime edge 
    GTCGGGAACG CAGGAGAATC GCTTGATCCT AAAGTAACCT TGTTTCGACG 
    CGATTCTCTG ATCTCCACCG TGTTTGATGT AGATTTGCGC GTAACACTTG 
    CTTCAATACA CACNGAGCTC TTCAATCTCA CTCATTCTAT GGAATTACTG 
    AAGAGATTTA ATGAAAAAGA AGAATGGCAG TGTGTCGATA TATATAGATA 
    TATCAAAACC TAAACGAGTT AGGATTAGAA AAACCAAAAC CAAAAAAAAA 
    GGAAATCTTC TATTTCCCTT TTATGANAAA ATTAAACAAC GGNGGTAACC 
    ACATGGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26734333 [Map]; Strand: c
      • AT1G70910.1 - [+] show detail - RING/U-box superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-3363-1 - 3-prime edge 
    TTCCCGACCC CTCACCTCTT TTTGAAAAAC ATCGTGAGCT TTGATGAACA 
    AAGCATGTAT AATCTTCTCT ATCCAAGGCT CCAAGATCCC AACTTATGCA 
    GTATTCTCTC CTTCAAGATC GCTTTCGAAG CCAAGCGAGT TCCAGGGCCG 
    TTGTACATCT CCTATGACGT CACATTAACC CCACAAATAT TCGAGGAACC 
    AGACATGGAA ACATGCGGTC TTTGCTTGTT GGAGGAACAG CACTTATTCG 
    ACATGCCAAA TTGTGCGCAT GTGTTTCATG GTGATTGTAT CGATAAGTGG 
    TTAAGTACAA GTAATAATTG CCCTCTCTGT GGTGTTGAAA TTATGGATGA 
    CGACGAGTGA CGAGCATCGT CATGAAGAAA CGATTACGCA TTATGATATT 
    CTGTATTGAA ACCTATCACT TGATTTTTTA ATATGTTAAT GGGAGAATGT 
    TCCTAAACGA GATGTACTCT CCGGTTTGGA AAGGAACTCA TGAAATTGTT 
    TGTGTTAATC TGCATACTAA CCTAAATATC TAAGCATAAT CGGATAATAA 
    CCTTCACGGC TTCACATCAT GTCGAAATTG TGTTATCAGA ATCAACAAAG 
    TTGTGCGCGC GTATACAAAC TTGTGAGGAA TTTGGTTCAA TTCGTAAGAA 
    CAAACTTATT CATCAGAACC GGAGAAAAGA CAACATATAG TTAACCGGAC 
    CAAGGTCGGC TAGATAAAAC AAAAGCAG

AT1G70910.1

Model type
Protein coding
Short Description
RING/U-box superfamily protein
Curator Summary
Encodes DESPIERTO (DEP), a RING finger protein involved in ABA sensitivity during seed development. Regulates the expression of ABI3, and produces a complete loss of dormancy when mutated.
Computational Description
RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G57730.1); Has 4098 Blast hits to 4089 proteins in 211 species: Archae - 0; Bacteria - 0; Metazoa - 942; Fungi - 90; Plants - 2574; Viruses - 12; Other Eukaryotes - 480 (source: NCBI BLink).
Link
InterPro Scan - TAIR