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Mutant Lines
13-2940-1

13-2940-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 143549 [Map]; Strand: c
- AT2G01275.1 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
  Distance: 0; Region: intron2 (CDS)
- AT2G01275.2 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
  Distance: 0; Region: intron2 (CDS)

ATAAACTAAC AAAATCGGTT ATACGATAAC GGTCGGTACG GGATTTTCCC 
ATCCTACTTT CACACAATTA GAAACATTTT TCCCAAGTTA AGAGAACATT 
GGTTGGATCG GATGATCAAT GTTGTTGGTT TAACTTGGCA GTATGCGCAT 
AGGAGGTGCG TACAGAGATG GTGTAACGAG AAAGGTGATA CCACCTGCGA 
GATTTGCCAT CAGGTTTGTC TCCTCTCTTT TTTTTTTTTT TTTTTTTNNG 
NAAAAAAAAN CCCNCCCCCC TTNANTCCNC CCCCNCCCCC NGGAAAATTN 
CCCCNNGGCC CNNCNCCTTT TGGCCCCCNN TTTTTTTTTN GCCCTTTNAA 
ANNAAATCNG NNNAAAANAA NATNNTTTTT TTTTTTNNNG NANTNAAAAA 
NCGGGNCCGG GACCCCCCCC CCCCCTNAAA NNNNNNNNNA A

3 prime edge [+] show sequence

Chromosome: 2; Position: 143560 [Map]; Strand: c
- AT2G01275.1 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
  Distance: 0; Region: intron2 (CDS)
- AT2G01275.2 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
  Distance: 0; Region: intron2 (CDS)

ATTAAAACGG TAGAGGTATT TTACNGACCG TTACCGACCG TTTTCATTGT 
GTTTACCTTG ACGCTGCCGC TGCAAGAACA AGGAGTCTCC ATGTTGGAAT 
CCAAGTCCTC GTCGTGACAG ATCCTGCACT CAGCCATTGA CAAATCTCCG 
TTACGCAGCA TCTCAAGTGT TTTATCGTCC AAGATTGTAC ATTCCTCAAC 
GGGTATATTA GCTTGCAACA TCTGGTTCCT GCTCTGAATC GCAGCCTCAA 
TCGTGGATTC TGTTATCAAC CGATCCACCA GCAGCACGAA ATGATCTCCC 
ATGTTCTCTG TTCTCACGGT ATAGAAAGAA ACGTGCAGCT GAAGAAATGA 
TAAATAATGG GTTGGGGTCA GAATTTGCAT TTAATGCTAA GGAGATTCCA 
TACGCAACAT GAACATGTGA ATTAGAAGAT GCGAATTAAT GAAGAAAAAG 
TTTGAAACAT TGATGAGATC AAGGCGACTT AAAATAAGCT AAAGAAGTTT 
AATTTGTGGA TTAATTGAAA GAGCTAATGA TAGATGGTGG TTTAGGTAAA 
GCTGAACCAA ACCTGGTTGG TTACCAGAAC ACAAAAGCTG TACAAACTAA 
ATATGTTTCT TATTGTTTGA CCAAACTAAC TGCACAAAAG TTTATCAAAA 
CGGTTTAGTG GAATTTTGCA CCCAAAAAAG AAAATTAAAT CTAAAAATCT 
GTATTTACCG NAGTCGAATC GTCTATGTAA GGGTTTTCAT AATTTGCAAT 
AAATAATAAA TTTAAGACGG NAAACAATTA NANAAAGTTT TGAATGAATG 
AAAAATCNCT N

AT2G01275.1

Model type: Protein coding
Short Description: RING/FYVE/PHD zinc finger superfamily protein
Computational Description: RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G38070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01275.2

Model type: Protein coding
Short Description: RING/FYVE/PHD zinc finger superfamily protein
Computational Description: RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G38070.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR