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13-2850-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4761603 [Map]; Strand: w
      • AT1G13930.2 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stres...
        Distance: 0; Region: exon1 (3UTR)
      • AT1G13930.3 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stres...
        Distance: 0; Region: exon1 (3UTR)
      • AT1G13930.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium io...
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: 13-2850-1 - 3-prime edge 
    CCCATAAACA TAAACGAAGC AACATAAACT AGTCACAAAC GATACTAGTT 
    ATTTAATTTA TTATTACGAA AATGATGAAC AACAATTAAA GATCAAATCA 
    CTTCAAGAAA CCTTGAGCCA TCTTGGCATA ACCTCCAAGC CCACCACCAG 
    ACTCTTCATC GTCTTTCTTA GCCGCCGGCT CAGGCTGACT TGCTGGCTCA 
    GCCTGACTCG TCGGAGGAGG AGGACCACCA GCACCGGTGG AGTGTGACGA 
    CTCGTAGTCG TTGAGATACT TCTCAGCCTT GTCGAGGTAC TGACCAGTGC 
    TACTCTTTTC ATCGAACTTA CCGTATTTCT CGGCAGCGTC TAAGATATCA 
    GCAGAGGCTC CGGCGACTTT ACCCTTGTCG AGTTTGTCTG ATTCGTTACG 
    AGCTGCGGCT TGAGCAGCTT CAGCTACAAC CTTGGCACTT GCCATGAGCT 
    CGGCGTTGGT AGCTGGTCTT GTAGCTGTTT CGGTTCCTTC GACTGGCTTG 
    TTGTGGTCTG GCTCCTCTGG TGTTGAGCTT GAGAGTTTCT TTACCTGATC 
    GGAGATGAAA TTCATTTTTT CCTTTTTCTC TTGAATATAA TTTTTTGTTT 
    TGTTTTTTTT GGATGGAAGA GTTAAGAGAT GGATATGTGT ATATATAGAC 
    TAGAAAATGG ATATGTTGGC CACACAAAGA AAAAGAAAAA AGTNTACTAT 
    TATCTACTTT CATTAATGAT TTTTAAGCCA CTA

AT1G13930.1

Model type
Protein coding
Curator Summary
Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress.
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion, response to salt stress; LOCATED IN: chloroplast, chloroplast stroma, plasma membrane, chloroplast envelope; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: nodulin-related protein 1 (TAIR:AT2G03440.1); Has 64 Blast hits to 64 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G13930.2

Model type
Protein coding
Curator Summary
Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress.
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nodulin-related protein 1 (TAIR:AT2G03440.1).
Link
InterPro Scan - TAIR

AT1G13930.3

Model type
Protein coding
Curator Summary
Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress.
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nodulin-related protein 1 (TAIR:AT2G03440.1).
Link
InterPro Scan - TAIR