Home
Mutant Lines
13-2409-1

13-2409-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence
1. Chromosome: 2; Position: 18986058 [Map]; Strand: c
  - AT2G46230.1 - [+] show detail - PIN domain-like family protein
    Distance: -99; Region: promoter
  - AT2G46230.2 - [+] show detail - PIN domain-like family protein
    Distance: -99; Region: promoter
  - AT2G46240.1 - [+] show detail - BCL-2-associated athanogene 6
    Distance: -75; Region: promoter
Flanking Genome Sequence: 13-2409-1 - 5-prime edge
```
CTCGCATCAC TTTGAAAAAT CTGGAATTTT CTCTTCGTTT CTTAACCTTT 
ACTAACACGT GATTTAAGAA ACTCGCTTCG CTTATGGGCC ATATAAATTA 
GGCCCATTTA TTTTATTATT GGGCTTTATA ATTAGGCNTG TATATTGAGC 
GTTAGTCTCC GTCTCTGATA CCCAATTCGA AAACCACTTC TCAGCCTCCG 
CCGATTCAGA CCTCGCATAT TCAGCTTCCC AGTCTTTCTC TCTGCGTCGT 
TCTAGGGTTT TTGTTACTCT TTGCTTCGAA GATGGGAAAG GCAAAGAAAC 
CTCAAAAGTT TGCTGTCGTG AAGAAGATGA TTAGCCACAA AGCT
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 26111649 [Map]; Strand: c
- AT1G69450.1 - [+] show detail - Early-responsive to dehydration stress protein (ERD4)
  Distance: -1501; Region: intergenic
- AT1G69460.1 - [+] show detail - emp24/gp25L/p24 family/GOLD family protein
  Distance: 160; Region: intergenic

GGGGNGNGGN CGCGNCAAAN NAGCNAGGAA AAAANAAAAN NATGAGATTT 
TAAAGCNACT TTTTANANGG AAAGAGTNTT TTTCTNGACC GTNACCGACC 
GTTTTCATCG GCACTTCTAT TCCAAAATAT GAAATAACAT GTNTACATAT 
AAATTATAAA TATCAGAGTG AGTCCAATAA TTGGTTCTGA TNGAGATAAG 
CTGTATAATC TAAAACCTCA GACAAACACA ATTTATTTGA CTTTAAACCA 
TCAAAGTANC CTAAAGGACC AACNTATCTA AACAAAAACT AAACTTANCT 
TGGAAAAAAG CNGNATCNNG CCACGACAAA TNGAATCCCG CAGNNCNGCA 
CAGGAACGCN AGCGCCTNCG GCNAGNGNAT CNANCAGTAC NCACACCNCN 
AAACACNANA ACACNCAACA NGCCCNGGCG CCAATGAACA ACNACAAAGA 
ACCNNACGAC CNNCCGCNNA CNNGANANAN CGANCCCGAN CAANCCGNNN 
NCTCNCTCGC AAGNAAGGCC CCGCAANNGC GCNNANGCNT CGGANCGCNN 
GNCNCGNCGC CNATGCCCGA CNGACNACNC NGAGCAGANN CATCNNACCC 
CNGNNCAGNG NCGNGAGNAN NGCACAGAGN ANCNAGCAGG AGNNAACAAN 
GCAANGGGAN NTCCNGTCCN NCGCANNNNG CANCACGNAN CGCNGCACNC 
GTANCNNNAC CACGANCANC AGNACCACAA NNGNACANNA CANTCGNCGN 
GNCCCNNCCG TNNCGNAANN NANACANCGN NAANCGCNNT CNCTANATCN 
ANNNNANNTG NTNCACNACG CANAACANCA CNACATTNCC NAGGNNAACN 
CAGNNCNNNT NNCCNGANNC NACCCNNNCG NCCNGANNNT NCCAGTNCCC 
CNGGTNTNTC NCACNNCANC NCGCACGCAC NCNNACNAAG NGACAACNCA 
AGAGNNANGN NAC

AT1G69450.1

Model type: Protein coding
Short Description: Early-responsive to dehydration stress protein (ERD4)
Computational Description: Early-responsive to dehydration stress protein (ERD4); LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: hypothetical protein 1 (TAIR:AT3G01100.1); Has 1403 Blast hits to 1256 proteins in 188 species: Archae - 0; Bacteria - 0; Metazoa - 177; Fungi - 667; Plants - 417; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G69460.1

Model type: Protein coding
Short Description: emp24/gp25L/p24 family/GOLD family protein
Computational Description: emp24/gp25L/p24 family/GOLD family protein; FUNCTIONS IN: protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: guard cell, callus; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT1G26690.1); Has 1501 Blast hits to 1499 proteins in 239 species: Archae - 0; Bacteria - 0; Metazoa - 645; Fungi - 467; Plants - 241; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G46230.1

Model type: Protein coding
Short Description: PIN domain-like family protein
Computational Description: PIN domain-like family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF652 (InterPro:IPR006984), Nucleotide binding protein, PINc (InterPro:IPR006596); BEST Arabidopsis thaliana protein match is: PIN domain-like family protein (TAIR:AT1G26530.1); Has 697 Blast hits to 697 proteins in 237 species: Archae - 32; Bacteria - 0; Metazoa - 241; Fungi - 212; Plants - 105; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G46230.2

Model type: Protein coding
Short Description: PIN domain-like family protein
Computational Description: PIN domain-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF652 (InterPro:IPR006984), Nucleotide binding protein, PINc (InterPro:IPR006596); BEST Arabidopsis thaliana protein match is: PIN domain-like family protein (TAIR:AT1G26530.1); Has 609 Blast hits to 609 proteins in 228 species: Archae - 22; Bacteria - 0; Metazoa - 231; Fungi - 162; Plants - 97; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G46240.1

Model type: Protein coding
Short Description: BCL-2-associated athanogene 6
Curator Summary: A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Expression of BAG6 in leaves was strongly induced by heat stress. Knockout mutants exhibited enhanced susceptibility to fungal pathogen Botrytis cinerea. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.
Computational Description: BCL-2-associated athanogene 6 (BAG6); CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 5 (TAIR:AT1G12060.1); Has 21821 Blast hits to 15371 proteins in 1199 species: Archae - 184; Bacteria - 2603; Metazoa - 10110; Fungi - 2300; Plants - 994; Viruses - 95; Other Eukaryotes - 5535 (source: NCBI BLink).
Link: InterPro Scan - TAIR