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Mutant Lines
13-2140-1

13-2140-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 11768090 [Map]; Strand: w
- AT4G22240.1 - [+] show detail - Plastid-lipid associated protein PAP / fibrillin family protein
  Distance: -786; Region: promoter
- AT4G22250.1 - [+] show detail - RING/U-box superfamily protein
  Distance: 0; Region: exon1 (CDS)

GTCGCGAGAT TCATACCCGT ACCCGATCCA TGATCCGATT CGAGAACGAG 
TCCGGTTTCA ATTTGTAACT CTTCGATTTC GTCGTCTCTT GAGGTTGGAC 
TGTGAAGAGT GGTGTTGTTA GTTAGACGGA GATTCCAGGT TGGACCACAG 
CATCCGATGC ATTTGAATCT CAACCGTTCT TTTAACGTCC GTTTCCTTCT 
GGTGAGATCG TGACCGCTCA TCTGTCGGCG GAGCAAATCA AGAAACGTCG 
TCGTCGTGCG GTGTGTTTCC GTCATCCTCT GACTCGTTCC GAGATCGAGT 
TCACTCATCA TCGACTCGGT AACGGAAACT CTANACAAAT TCTCAGATAN 
TGAAACAGAA TCACCANCGA AATAGACAGA TTAGCTCCGC CATGANAGAG 
CCCTGTGAGG GAGAGAGANA AACTGTTTAG ATCTTTGGGT CTCGCANATG 
ATGATGACAT TATAAAGGAA GCTTNTCAGA GNTTTNTTTT NNTTTNTCNA 
NTTCCCNTNA NTTTTTTATN NAAGCTCNCT NCCCNAAANT TCGNTTTCCC 
TTCNANNTAA CATNTACCNT TNTCNNAGTG TCTACNNCAN CTGCNANNCG 
TATNATNCNG ANNTNTNATT ATACNGGGNC NTTNCCNNNC NANNTCTNAG 
ACNNCGNNNG GAAAGTCGGN NNACNACGNN NAGNATNTGT GTTCAGAATN 
NGANGNANNN TNANTNTNNN TNNCNAGACA NCCGCCNNAN NNTAGCGTCG 
AGCCGNNCCA TGGGTNCNCN CATTTNNNNG NNNGANCNNN NTNNATNNAG

3 prime edge [+] show sequence

Chromosome: 4; Position: 11768021 [Map]; Strand: w
- AT4G22240.1 - [+] show detail - Plastid-lipid associated protein PAP / fibrillin family protein
  Distance: -717; Region: promoter
- AT4G22250.1 - [+] show detail - RING/U-box superfamily protein
  Distance: 0; Region: exon1 (CDS)

GAAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTC 
GCGACAGCGT TAGAAGCGGA GAGGTATAAC CGTGGAGAAT CGACGGAGGC 
GGAGGCAGAT ATGACGCCGA GGAGAGTTTC GTTGATGAGA TTGTTGGAAG 
AGACGGCGGA GAAAATCGTT GATGACGACG GGAAAGAAAC GGAGATATTA 
ACCGGCGTCT ATTGGGACGT TAACGGGTAA TGATTCGGTG TGTTGCGTGT 
GTATGGGAAG AAAGAAAGGC GCTGCGTTTA TTCCATGTGG TCATACTTTT 
TGCAGAGTGT GCTCTAGAGA ATTGTGGCTG AACCGTGGAT CGTGTCCTCT 
TTGTAACCGT CCGATCATTG AGATACTCGA TATTTTCTGA AAACGATCGG 
ACGGCTAAAA GTTCTCGATC CACGTGAGTA AGTGAGGTGA TCCCTAGATA 
CGTTTCCAAA GTTTTAACTA CGGTTTGTGT ACTTTGTACG TTTCTTTTGG 
TTATTGAAGA AGATGATGTA AATGCAAAAA AGAATACAAA GAGGTTTTTT 
GTTCACGAGG CCCATTTAGT CTATTCAANC CCAGTAAACC TTTATTTTGG 
ATTTTATCTA NCCTAAACAA TGCTCNCCCT TACCCCCGNC NAGTGGATTN 
TTTGNCCGTT GATCTTTNTN TCTTNCCGTN GCAANNTTCG NANCNNAATG 
NCCNTTGATN CTTTGGGGNA AATNNTCNAT TTTTTCCCCT NTTGGNGGNA 
NCTNNNGNCN NNGAATGAAA CNCAAACCCT TACGNANCCN NGNNATTAAA 
ANCAACANNG GNCTATN

AT4G22240.1

Model type: Protein coding
Short Description: Plastid-lipid associated protein PAP / fibrillin family protein
Computational Description: Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast, plastoglobule; EXPRESSED IN: fruit, guard cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: fibrillin (TAIR:AT4G04020.1); Has 461 Blast hits to 460 proteins in 78 species: Archae - 0; Bacteria - 75; Metazoa - 0; Fungi - 0; Plants - 360; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G22250.1

Model type: Protein coding
Short Description: RING/U-box superfamily protein
Computational Description: RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G03965.1); Has 910 Blast hits to 910 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 334; Fungi - 67; Plants - 314; Viruses - 43; Other Eukaryotes - 152 (source: NCBI BLink).
Link: InterPro Scan - TAIR