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13-2076-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 17544261 [Map]; Strand: w
      • AT2G42040.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: WRC (InterPro:IPR014977); Has 219 Blast hits to 2...
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 13-2076-1 - 5-prime edge 
    GGGTAGTTAA GGGAAGAGTA ACACAATAAT ACTCATCTAA ACATGCACAT 
    CTCATGACGG TGCACGTTAG CATGGGATAC TCTTATACGA ATGGTCCCAT 
    ATCGACCCTT ACCTTGTGTG TGTGCTCTAT TATTGTCATT ATTGATTACT 
    TGTTCTTTTT TCTTGCACTC ATATATATAG ATCGCTTTCA TTTCTTTAAA 
    TAAAAAGTCT GATTACATTC TTTGTCCTTC TCTTGCTTCA AACAATCGCA 
    GCAAGAATGT TAATCCCCGA GGAGAATCCG ACTCCTCAAT ACAAGGTACA 
    CCATATATAG TGCTTGATCA ATATATGTTT TTGGTGAACT TCAGCTGTTT 
    TTTAGTTGCA CCATTCACCG TTTGTATGAA TATATATATA TATATATATG 
    ATAGNTGTCG ANAANAANGA AANGGNTGTG TCTTTGAGGA AGAGAAGAGG 
    CTTTATCNNC TTTGGGGATC ACGAANATGA GGAANATGAA NANNCTAGNG 
    GNGGNGGNGG CCGTNTTNAT AGGGGGAAAA AGANNGCGAA AAAGAGCGGN 
    GGNGGGTTAG AGGANAGATC ACGGCGCACC CGTGTTACGG TAGAGGATGG 
    ATATNTTGNC NACANACGCT TGTTGGTTAT TCTCTNTGAG AGCNCCCTCT 
    CNGTAANNGA GGGGTANGGA NCCTGACAAG AGGGGNGGGA NTCGNGNGGG 
    GGAAAAAAAG CGGNGGGGGG GGAAGANAAA AAAAAAAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 17544146 [Map]; Strand: w
      • AT2G42040.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: WRC (InterPro:IPR014977); Has 219 Blast hits to 2...
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 13-2076-1 - 3-prime edge 
    AACTACCCCA TGTATATATC CCCAAATGTT TACAGTGTGA TGAGAAGAAT 
    GACGATTATA AAACCATAAG AAAAGAAAAG GATGAGATCC AACCTGATCA 
    TTCATCTTCA AAACATTATA ATTCACAAAA AAAAAAAAAA ANTTTNAAGG 
    TTTNNNTTTN NNNNNANTGN CNNCCGGGGG GGGGGTTTTA AAANNTCCCN 
    CCCNGGGCCG GNANCCCCCC GGGCCNTNNA AANNNNNNNN GGNNNNNNNN 
    GNNNNNGNNN NNNNNNGGNN NAANNNNNGN NNNNNAANNN C

AT2G42040.1

Model type
Protein coding
Computational Description
CONTAINS InterPro DOMAIN/s: WRC (InterPro:IPR014977); Has 219 Blast hits to 219 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 215; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR