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13-1544-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 506847 [Map]; Strand: w
      • AT2G02070.1 - [+] show detail - indeterminate(ID)-domain 5
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 13-1544-1 - 5-prime edge 
    GANAAACTAA CAAAATCGGT TATACGATAA CGGTCGGTAC GGGATTTTCC 
    CATCCTACTT TCATTATACA GGCAATTCAC GTGCTGCTAA ACTATATAAT 
    ATCTAGGGAG GTTGTTGTTA CAGTGTTTGT TCTCTTATGT GTAAAATTTT 
    ACGAAAATAC AATTATTTCA TATGATTCGT TTGTACTCTG TACCATAGCC 
    ACATATTAGT TTGGTTCACT ACTCTACACA TTTTGCATAA AATGGCATAA 
    ATTTGCATAG ACGTGATAAC TAATAGACTA AATAATTATT TCGAATATAG 
    AGTTTTTTTC TCAGTCTTGG CTGGCATTGC TGTGTTTGTG TGTGTGCGTG 
    CATTTAGAGG AGTTCTATAA ATAGAATGAA GTAAATAAAT ATGTGGTGCT 
    GCAAATATAT ATAAGTAGCT AGTTTTCTTA AATAAAAATA TAAGTAGTTC 
    ATTGAATACA TGCTCAACTT GCATTTATTG AACATACAAG ATCTTGAATT 
    AGGACAAACT CAGATATTCA TTTGACAATC ATTCTCTATA CATTAGTGTG 
    AAACTTAACT TTTTCCACCT NCCCCNTGGA ATNANNAAAN NCGGGNCGNN 
    NANCACNCNN CCCCCCNCAN NNNNNNNNAA ANANANNAAN NAAAAAAAAA 
    AAA

AT2G02070.1

Model type
Protein coding
Short Description
indeterminate(ID)-domain 5
Computational Description
indeterminate(ID)-domain 5 (IDD5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 4 (TAIR:AT2G02080.1); Has 61158 Blast hits to 25844 proteins in 587 species: Archae - 8; Bacteria - 480; Metazoa - 52168; Fungi - 1154; Plants - 982; Viruses - 10; Other Eukaryotes - 6356 (source: NCBI BLink).
Link
InterPro Scan - TAIR