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13-1504-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1936094 [Map]; Strand: w
      • AT1G06350.1 - [+] show detail - Fatty acid desaturase family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 13-1504-1 - 5-prime edge 
    GGTAAACCAC CATAGAGATA GAGGATGGTC CAAAACATTA AGATGTGAAC 
    AGCAATAGTC CTTCGTAGAA ACTTATAAAA CCATTGCTTC TTCAAGTCCA 
    ATACGTTGTC ACGTCCTCCA CACNTGTTGC ATTACTTTGT ATTATTGCAA 
    CAACGTCATA AAACATATAA TATAAGAAAA TGAGAGATAT CTATACGTTA 
    CATTACCTTG TATTTGATGT ATTGGGTGTC AAATATCCAC AAGATATGGC 
    TGAACAATAA TCCTTCTTTA GGGCTATGTG GGTCGCGGTC CGAATCTGTG 
    AACTGGTGAT GGAACCTATG TATGCTCACC CAATCCATTG GATCACCCTG 
    AAAATATATT TTTTCTTCTC TAATCATATA CTTGGGAAAA AGAAAGAAAA 
    GCATTTGACA TGGTGGTAAC ACTTAGTTAG ATTCTCAAAA CGCTGGTGTT 
    AACCTGAAGA GCGAAAACAG CAGAATAAGC CCAAGGATAT TCGAGCCATT 
    TTGGTATCTT GAAGCTACGG TGAGACAAGT TCCTATGGAA TGAGAATGTG 
    ATGCTGAGTG TAGTCAACGC GAAGAGCACC AAACCGAACC GTAAAGCT

AT1G06350.1

Model type
Protein coding
Short Description
Fatty acid desaturase family protein
Computational Description
Fatty acid desaturase family protein; FUNCTIONS IN: oxidoreductase activity, oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water; INVOLVED IN: oxidation reduction, lipid metabolic process; CONTAINS InterPro DOMAIN/s: Fatty acid desaturase, type 1, core (InterPro:IPR015876), Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: Fatty acid desaturase family protein (TAIR:AT1G06360.1); Has 3426 Blast hits to 3426 proteins in 822 species: Archae - 0; Bacteria - 1532; Metazoa - 799; Fungi - 234; Plants - 106; Viruses - 4; Other Eukaryotes - 751 (source: NCBI BLink).
Link
InterPro Scan - TAIR