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13-1033-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17136046 [Map]; Strand: c
      • AT4G36210.3 - [+] show detail - Protein of unknown function (DUF726)
        Distance: 1390; Region: intergenic
      • AT4G36220.1 - [+] show detail - ferulic acid 5-hydroxylase 1
        Distance: 1298; Region: intergenic
    Flanking Genome Sequence: 13-1033-1 - 3-prime edge 
    ATGGCATGTG CCTCTGTGCG TGCTTCACCA CTCATGGTTC ATCCAAGTTA 
    GAATAAATTC AACGGTATAT AAATAAAAGC CAATATATTT ATTTATTTAC 
    AATTACAACC ATAAATTCAT CACCTCATTT CTTTCAAAAA AATCTATTTC 
    AATCCATCCA GCACTGCATT TATTTCAGAA AATCTAAGCG GCCTTACCAA 
    ACAAAGTTTT AATGAATATG GGGTCTTATA TGACTCAGTG TCCCCACAAT 
    CACAAGTACA GAACTTTATG AAAATGATCA AAAAAAATAT AAAGGCAATG 
    TCAATTTGCT GGTGAAAATA TTGCTATAAT TAACTTGATG GGTCGAGAAG 
    CTGTCTTCTC TANAANACAA NACAAACCCT ACTCGAACCA ACCCCTTTGC 
    AAAGCTGTTA CACTACAGTC TTTTAAGCT

AT4G36210.3

Model type
Protein coding
Short Description
Protein of unknown function (DUF726)
Computational Description
Protein of unknown function (DUF726); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF726 (InterPro:IPR007941); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF726) (TAIR:AT2G18100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G36220.1

Model type
Protein coding
Short Description
ferulic acid 5-hydroxylase 1
Curator Summary
encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.
Computational Description
ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink).
Link
InterPro Scan - TAIR