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Mutant Lines
13-0963-1

13-0963-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 9349163 [Map]; Strand: w
- AT1G26940.1 - [+] show detail - Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
  Distance: 4018; Region: intergenic
- AT1G26945.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
  Distance: -2291; Region: intergenic

GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TNNGANNNCN NCNTGTNGTT CGGTANATNN TNNCTCTTNG 
GGCCNNNACN AACCCAATNA GANCCCTTTG GNNGNTTCNA NGGANNNGCN 
CTCNTNANGT ACGNTNCATT ACCCGNTGGG ANANGNTACN NCGTNNNNTT 
TGNTCNAGGG TGGATGCNNT GGNGCNACAN GNGTTNCTAT GNACTTAATA 
TCNACCTTGG CCNAGATNNN GGAAANTTCN GAATNCNNGT GGNNNGANTC 
NNNTNTGNTT NNNANCNAAT ACGANAGCGG ATNAATNCAT CGTAANACAT 
GNAGAGGATT TTTGTTATGG GTATNNCNAA NNTNAAGNNN ANNGACATGA 
CTCANGCCCT TTTGATTTAT GGANCTNTGT AACAATGACG GCCCCNANGG 
CAANNAATNA AAGCCTTNAC AAAGTCCNTT ACANACGGNT NTATNTNGAT 
CANNACCTAA CTCNTGTGGA NNNNNACAAC NNCTATNGNG GATNNNTNNA 
TNATNGNCGA GNCANAGNAN ACATCTACCA CATAACCCAT GCAATGCAAA 
ATCAANGAAC TGAATNCAAT CNAGGGNCAA ATGCCTATCT TGGCCTTNTA 
CCACATGCTA CGTACTCAAA ATCAGATTTT TATGGAAGGG ATTAAAAAAA 
TCAGAGTTGN CAACTGGAAT TACATCCAAA ACATGATCCG NAATTTGGCT 
TCACATTTTT TGGGGGNTTN TTGNCC

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 9349174 [Map]; Strand: w
  - AT1G26940.1 - [+] show detail - Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
    Distance: 4029; Region: intergenic
  - AT1G26945.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
    Distance: -2280; Region: intergenic
Flanking Genome Sequence: 13-0963-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCT 
GTAACATGAA AATACATTGA TGAACACACA TTTAAAGCAA TAAACAACAA 
AAACACTATA GGAATTGGAT ATCGATATCC AATTAGACTA TTTGATTCGT 
CCAAGTCAGA ATT
```

AT1G26940.1

Model type: Protein coding
Short Description: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
Computational Description: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); BEST Arabidopsis thaliana protein match is: cyclophilin71 (TAIR:AT3G44600.1); Has 11471 Blast hits to 11465 proteins in 2220 species: Archae - 104; Bacteria - 5913; Metazoa - 1282; Fungi - 864; Plants - 581; Viruses - 0; Other Eukaryotes - 2727 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G26945.1

Model type: Protein coding
Short Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Curator Summary: Encodes a basic helix-loop-helix (bHLH) protein involved in blue/far-red light signaling. Physically interacts with HFR1 and negatively regulates its activity.
Computational Description: KIDARI (KDR); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: response to light stimulus; LOCATED IN: nucleus, chloroplast; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding family protein (TAIR:AT3G28857.1); Has 97 Blast hits to 97 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 97; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR