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13-0084-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3786716 [Map]; Strand: c
      • AT1G11270.2 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: 0; Region: intron1 (5UTR)
      • AT1G11270.3 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: 0; Region: intron1 (5UTR)
      • AT1G11270.1 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: 13-0084-1 - 3-prime edge
    TCTCTATCTC TCTAATTGAT TGATCAACAG ACAATTTATA TATATATATA 
    TATATACACA CACACACGAG GNGNGCTNAG NGAANTNAAA ACACACACTC
    NCCGAANATA NNTATANATA AATNATACAN GGGGAGAAGC CCCTCACGAA
    GNGANGAANN CANACNCTCG NGAGCNCGAT NTNTNNNTCT CNNCCCNNAA
    AACANTCTTT TNTANNCTAT NNGNGCGNNG NTGTNNNCGC TCNCNCNGGG
    GGGNGAGAGN GGCAGANATN NTCTNNTNNG ACNCNCANAA CNAGNNAGAG
    NTATNCNTGC CCCCTNTNTG CNNCCCTCTN TTTNTTGGGG GCTNNCNNCN
    CACANNNCTT TTTNTNTGNC ANATAAAAAA AANAAGNNCG NACNCGCCGN
    CCCNAAAAAG AANATAAAAC NCCCCNTGNT TTNTGACGTG ANTNAAAAAA
    AAAAAGNNGN NGGGNAANTT TTTTTNCCCN AAAAANATNT TTNNCCCNAA
    ANGGGGGGNN TAAAAAANNG GCNNNNGNNC NAAAANNTTG TTTTTGNNTG
    NNAANNCAAN NCATTTTTTT NNGNNNGGGG ANANCANNNN NNNTTNGGGG
    GNCCCCNCTT TTTTTTTTTT NNGGGGGGGG GGGGGGGNCN NCNNCNNTTN
    TNNNNNAGAC CCCCCTGNTN NTTTTNACCA NNANGATTNN CCCCCCCCGC
    C

AT1G11270.1

Model type
Protein coding
Short Description
F-box and associated interaction domains-containing protein
Computational Description
F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT2G34280.1); Has 1191 Blast hits to 1176 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1189; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G11270.2

Model type
Protein coding
Short Description
F-box and associated interaction domains-containing protein
Computational Description
F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT2G34280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G11270.3

Model type
Protein coding
Short Description
F-box and associated interaction domains-containing protein
Computational Description
F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT2G34280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR