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Mutant Lines
12-5625-1

12-5625-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 22564276 [Map]; Strand: w
  - AT1G61200.1 - [+] show detail - homeobox-leucine zipper protein-related
    Distance: -856; Region: promoter
  - AT1G61210.1 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
    Distance: -219; Region: promoter
  - AT1G61210.2 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
    Distance: -219; Region: promoter
Flanking Genome Sequence: 12-5625-1 - 5-prime edge
```
ATTATGATGG AGTTGGAGAA AAAAACTCAA CCAATAGAAG TCAATTGGAA 
GCAAGGGTTC TTTTCGTAAT TTCCACTCGA ATT
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 22511967 [Map]; Strand: w
- AT1G61100.1 - [+] show detail - disease resistance protein (TIR class), putative
  Distance: 0; Region: intron1 (CDS)
- AT1G61100.2 - [+] show detail - disease resistance protein (TIR class), putative
  Distance: 0; Region: intron1 (CDS)

TGAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTG GTAAGCTACC 
TCCTTCTACC TTAACCAAAC CACAGTGGGA GTAAGAAGGA GAAGCTAGCT 
TCAGGGATTT TTGAACCATT CGTCTCTCAT CTTAAGTTCG CTAGAGATCA 
GATCTCTAAA GGCGGTTACT CCATTTCTCT GACTCCTCCT TCTTCTCACT 
CTTCTTGGTT CACCAAATCC ACTTTTGATC GGTAATTTCA ATTTTGATTA 
TCCGGCTTCG ATTTTGTTGA CAATTTCCAA ATTCAGATTC GAATTATGCT 
AATTCGAGTA GAAATCTGGT GTTTATGTCA AGTTTGTGAT AATGACTTTG 
TGATGATAAA TGGTGTGTGG AAGATTTTTG TTACTGTGTA GAGACAATGT 
TGACTTGTTA TTGATTAAGT TTCTTTAATT GTAGGTTTGT GAGATTTGTA 
AACACGCCTG CGATTATCGA AAGATTTGCG ACTCTGGAGA AAGAGATTTT 
GCAGATTGAG AATT

AT1G61100.1

Model type: Protein coding
Short Description: disease resistance protein (TIR class), putative
Computational Description: disease resistance protein (TIR class), putative; BEST Arabidopsis thaliana protein match is: COP1-interacting protein 7 (TAIR:AT4G27430.2); Has 1636 Blast hits to 1307 proteins in 221 species: Archae - 4; Bacteria - 130; Metazoa - 666; Fungi - 143; Plants - 195; Viruses - 9; Other Eukaryotes - 489 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G61100.2

Model type: Protein coding
Short Description: disease resistance protein (TIR class), putative
Computational Description: disease resistance protein (TIR class), putative; INVOLVED IN: defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: COP1-interacting protein 7 (TAIR:AT4G27430.2).
Link: InterPro Scan - TAIR

AT1G61200.1

Model type: Protein coding
Short Description: homeobox-leucine zipper protein-related
Computational Description: homeobox-leucine zipper protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: homeobox-leucine zipper protein-related (TAIR:AT1G20280.1); Has 18 Blast hits to 18 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G61210.1

Model type: Protein coding
Short Description: Transducin/WD40 repeat-like superfamily protein
Computational Description: Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G11160.1); Has 121273 Blast hits to 45862 proteins in 1282 species: Archae - 102; Bacteria - 12578; Metazoa - 49683; Fungi - 26785; Plants - 15760; Viruses - 206; Other Eukaryotes - 16159 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G61210.2

Model type: Protein coding
Short Description: Transducin/WD40 repeat-like superfamily protein
Computational Description: Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; LOCATED IN: CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G11160.1).
Link: InterPro Scan - TAIR