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12-5469-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22620994 [Map]; Strand: c
      • AT1G61320.1 - [+] show detail - FBD / Leucine Rich Repeat domains containing protein
        Distance: 1141; Region: intergenic
      • AT1G61330.1 - [+] show detail - FBD, F-box and Leucine Rich Repeat domains containing protein
        Distance: -1981; Region: intergenic
    Flanking Genome Sequence: 12-5469-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCAC CAAAACACCA GGTAAATTTG GTGTGTTTTG 
    GTGTTTGATT TTTTTTCTAT CTCCAACCAT CTCACACCAA AAACAAAATT 
    TTGTATTATT AAATTTAAAA TTCACTTTAT TTTTAATAGT TTGATAAACA 
    CTAATTATTT TTAATACTGA TTTAGTAATT TTATTAATAT AAGTTTACAG 
    TCGATAAATT ACAAATAATA TAAAATACAT TACAATGTTT TTTATTTTAA 
    ACAATTTGAT ATATATTTAG AAAATTTGTG CAAATTATTA TCCCATATTA 
    ATTTTAATTA AAAGTACATA TCATTAAAAA TGAAAACATT CAAAAATATT 
    GAAAGTATAC TTGTCTTTTA ATTGATAAAC GAACAACAAT TAACAAATAA 
    AATTAAATCT AAAACACAAA TAAAATAATG GTTTATTTTT GGTGCTTTGT 
    GAACAGTGTT TCACCAAATT AAACAACAAA ACAAAAAAGA TGTCGTCCAT 
    TATAGAGTAT CGTTGGAGTT GAAATCACCA AATATGGTGT TTTAGTTTCT 
    CCTTGGAGAT GGTATTATAT AGCAACAAAT GTGAGTGTTA TTCCTCCTAT 
    TTTCAGTAAA TTTTCTAAGT TACCAATTGT TTTTTGTTAT TTCAACTTTT 
    TATGGNNCTA TCTTTCCATT TTCTTTATCC AAATTTAGTA AAAATAAAAA 
    AAGGCCTAGC TAGCTAC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22622420 [Map]; Strand: c
      • AT1G61330.1 - [+] show detail - FBD, F-box and Leucine Rich Repeat domains containing protein
        Distance: -555; Region: promoter
    Flanking Genome Sequence: 12-5469-1 - 3-prime edge 
    GTNCCATGGT TGGAGTTGTT CTAATGTGTC ATCTCTAAAA GATATGATTN 
    GGAGCCATTC AAAAATCTAC CAAAAAATCA ATTAATTTTA CTGGTAAAAT 
    AATATGACAT ATTTGGTCCC AAAATTTAAT TAAATTCTAT GTCAATTTAA 
    ATATAATTTA TTAGTAAAAA ATGGTAATAA TATCACATAT CTGGCAACAA 
    TTCATAATTT AATACAAAAG AAGAAGTAAA TCTACTATTT TGTCAAGTTT 
    GGAAAGCAAA TGTAAGATTA AAGAAACAAA TATTTAAAGT TGTTATTAAT 
    TAATTATTTG ATAACAATAC ATAAAATATG GATTAAATCA AATATATATT 
    TTTGGAGAAA AACATTTACA TATACCTTAC ATAGCCAAAA ATATTTTTTT 
    CTTTATTAAG AAATTCAATA CTTTTCAAAT TATATCNGCA TCTAAACAAC 
    CCAGAAACAA CANTTGATTA ATNTNAATAA GTTTTCAACA CACCTGTTTT 
    TGCTACANTT ANAAAGCNAC AAATTNATNC TTNGTANGAA AAAATACATA 
    GCCAANCCAT AATTNTCTTN TTCCGAAGGN ATCTAAACTA GTGAGGGAAT 
    CCATCGCGAC CAAATGTCAG AAGCGTCTAN TAGGCANATG AAACTCATCN 
    AAANGATNGG CTGATTGAGN TGGGTGGANG TGCATCGTTG NCATTTGCNN 
    CCANGCCAAT CANNCTTACA GC

AT1G61320.1

Model type
Protein coding
Short Description
FBD / Leucine Rich Repeat domains containing protein
Computational Description
FBD / Leucine Rich Repeat domains containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566); BEST Arabidopsis thaliana protein match is: FBD, F-box and Leucine Rich Repeat domains containing protein (TAIR:AT1G61330.1); Has 419 Blast hits to 418 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 419; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G61330.1

Model type
Protein coding
Short Description
FBD, F-box and Leucine Rich Repeat domains containing protein
Computational Description
FBD, F-box and Leucine Rich Repeat domains containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566); BEST Arabidopsis thaliana protein match is: FBD / Leucine Rich Repeat domains containing protein (TAIR:AT1G61320.1); Has 1015 Blast hits to 1010 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1009; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR