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12-5331-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22609611 [Map]; Strand: c
      • AT1G61300.1 - [+] show detail - LRR and NB-ARC domains-containing disease resistance protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-5331-1 - 5-prime edge 
    ATCCGANTGA AGTAAATANN TGCAGAGTAG CAGTTCACCA CCCGAGATCA 
    AAAAGTTAGN GGGGAAATGG GGGATCATAA GCCAGATGCA AGTCANNTGN 
    ATGGAACCAN AGGATGCNTG GNAGTTGTTN AANAACNNGG TCGGAGACAA 
    CACATTACGT ACCTGATCCC CTNNTTGNGG NGTNNGCGAN AAANGTCNCT 
    NAANAATGAC TNGGTCTGGC CTNGNCGCTN TNNGTCNTTG GTGAGACAAT 
    GTCATCTACA ACTATGGTAC AAGAATGGGA GCATGCAATC GATGTTTTGA 
    CTAGATCCGC TGCAGAGTTT TCTGACATGC AAAACAAAAT TCTTCCGATT 
    CTCAAGTACA GCTACGATAG CTTGGGGGAT GAACATATCA AGTCGTGTTT 
    CATATATTGT GCTCTGTTTC CTGAAGATTT TCAGATNGTT AACGAAGATG 
    ATGAGATATA TAACGACNGG TTGATAGACT ACTGGATATG CGAAGGATTC 
    ATCGGANAAN ACCANGTTTT ANANANAGCG AGGAATAAGG GTTATGCNAT 
    GCTTGGTACC CTTATNCNNG CTANTTTNCT NCAAAGGNNA NNNCNANTTN 
    TNGNGANATG CNTNANNTNN NNNNNNAAA

AT1G61300.1

Model type
Protein coding
Short Description
LRR and NB-ARC domains-containing disease resistance protein
Computational Description
LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, apoptosis, defense response; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT1G61310.1); Has 27714 Blast hits to 22073 proteins in 822 species: Archae - 18; Bacteria - 5358; Metazoa - 4578; Fungi - 354; Plants - 16806; Viruses - 2; Other Eukaryotes - 598 (source: NCBI BLink).
Link
InterPro Scan - TAIR