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12-5322-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22620168 [Map]; Strand: c
      • AT1G61320.1 - [+] show detail - FBD / Leucine Rich Repeat domains containing protein
        Distance: 315; Region: intergenic
      • AT1G61330.1 - [+] show detail - FBD, F-box and Leucine Rich Repeat domains containing protein
        Distance: -2807; Region: intergenic
    Flanking Genome Sequence: 12-5322-1 - 5-prime edge
    CCTACGATCT ACGTACCACC TATATATGTC GTGAACGCAA TGGGAGACGT 
    CACCAATGTG ACTATACACC GGCTGACAAT CTCATATCCA CCTTTAACAG
    AGTGATCTCC ACCCGCATAT CTTCGTCGGA CAACGTTCTT GAGGAGCTGC
    CATGGAGATG GAACTTACTA TCTAGGCCTT AATTTTAGGC TATATTTCAT
    TTATTTAAGC AGCTCTATTT TTAAATGCCT CTTTGTCTAG TACTTGATTT
    ACTGTTAAAA AAAAAATTTG ATTAATAAAT TTCACATTTC ATATAAAATA
    AATNGGAAAA ANAGTTCAAA CCTGAAATTA AACAAAGTCN TAAACAATAN
    AATTTCAAAC TAANANATTT TTTTTTTTTT TTTTTTTNGG GGNAAAAANT
    TTNAANNNNA AAAAANNNTT NAAAANCCCA AAAAAAAAAA AAAAAATTGG
    NNAANNNTTT NNNNNNTTAA AANNNNAAAA NNNAANTTTT TTTTGGGGGN
    NNNGGGGGGG GGNNNNNCCN GGNTTNAAAN NNGGGGNNTT TNNCCCCCAA
    AAAAANGGGN TTTNAAANCN NTNNNNNNNC NCNNNNGGGG GGGGGNANCC
    NNNTNTTNCN NTTTTNGGGG GNTGGNANCC CCNCCCCTTT NAAAAAGGGG
    GGGNTTTTNN AAAAAAANTT TTTTTTTTNN NCNNNCNCCN GGG

AT1G61320.1

Model type
Protein coding
Short Description
FBD / Leucine Rich Repeat domains containing protein
Computational Description
FBD / Leucine Rich Repeat domains containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566); BEST Arabidopsis thaliana protein match is: FBD, F-box and Leucine Rich Repeat domains containing protein (TAIR:AT1G61330.1); Has 419 Blast hits to 418 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 419; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G61330.1

Model type
Protein coding
Short Description
FBD, F-box and Leucine Rich Repeat domains containing protein
Computational Description
FBD, F-box and Leucine Rich Repeat domains containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566); BEST Arabidopsis thaliana protein match is: FBD / Leucine Rich Repeat domains containing protein (TAIR:AT1G61320.1); Has 1015 Blast hits to 1010 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1009; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR