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12-5127-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22610023 [Map]; Strand: w
      • AT1G61300.1 - [+] show detail - LRR and NB-ARC domains-containing disease resistance protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-5127-1 - 5-prime edge 
    GTTTTTCCAA CACCACCCAT ACCGTGAAGA CCCATGATTC CGACTCTATC 
    TTCCATAAGG CGATTCCATG CCTTTTCGAG CATTTCTTCT TGACCAATAG 
    TAGGCTGAGT AGGCCTCTCC TCCACTCCAA AAGAGTTTCT GTTGATGTTC 
    CCACATAAGA AATTAAAGAT ACGTACCAGG GTTTGATCAT CAAAAGAAAA 
    CTGGACAGAA AAACAACACC CCATAAATTT GATGTAAAGA GAGAAAAGTT 
    TCAGTAAGCA ACAACGAAGC TAAAGCTGAA GATGAAGAAG TGTTTTAGAT 
    AACATCTTGC TCCAATACGG GTGGGTTGAG ATTATCAAAG AAAGATAGAA 
    GATAATAAAA GACATTGCTG TCACTGATTT TCAGACCACC CATTTTCCAT 
    ATGAAGGACT TTGATTTTTC TTTTCTTTTT TTGGTAGCTA AAGTCCATAC 
    AAATTAGTT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22609907 [Map]; Strand: w
      • AT1G61300.1 - [+] show detail - LRR and NB-ARC domains-containing disease resistance protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-5127-1 - 3-prime edge 
    GGAAAAACCA CCCTTTTCAA GAAAATCCAC AATAAGTTCG CTAAAATGTC 
    TAGTAGGTTT GACATTGTGA TCTGGATCGT GGTGTCTAAA GGCGCAAAGC 
    T

AT1G61300.1

Model type
Protein coding
Short Description
LRR and NB-ARC domains-containing disease resistance protein
Computational Description
LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, apoptosis, defense response; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT1G61310.1); Has 27714 Blast hits to 22073 proteins in 822 species: Archae - 18; Bacteria - 5358; Metazoa - 4578; Fungi - 354; Plants - 16806; Viruses - 2; Other Eukaryotes - 598 (source: NCBI BLink).
Link
InterPro Scan - TAIR