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12-4717-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22555658 [Map]; Strand: w
      • AT1G61180.2 - [+] show detail - LRR and NB-ARC domains-containing disease resistance protein
        Distance: 1009; Region: intergenic
      • AT1G61190.1 - [+] show detail - LRR and NB-ARC domains-containing disease resistance protein
        Distance: -1944; Region: intergenic
    Flanking Genome Sequence: 12-4717-1 - 3-prime edge
    GTCAGAAGAC GAAGCGTCAA AGATTGAGGG AGAAGAAGAA GACTTTGGTT 
    TTAAGTGTAA AAGGGCTTTT GGGCCACAAA TGTATTTAAG GCCCAACTAG
    TAAATGGGTT TAGAGGTTTG CACAAAAGTT ATAACTATGA AATTTCAGGT
    ATGTTCAAGG TTTTGTTAAG ACAATGTACA AGAAAATAAA CGTTTCAGTT
    TTCAGCGACT TTTACAGAAG GTTGTGGTGA ATCTTTGATC ATGCAATCTA
    CGATTTAAAG TAAAGAGTCA ACATCTATTA GTAACCTTTT CATCGTTTTG
    AATGTTTAAA AAGAGCACAA AATTTGGTTT TTAGATGGTT TCGTGCTGGC
    TCCAAAGAGA TTCGTAGATA ACTTCTCCGA GACAAGAGAG GGGAGGCAAT
    ATTCAAATCC TTCATTTGAT GCTTAAGGGA TAGCGCATAA AACGAACTAA
    GTCTTAAAAC TAGTTATAAA GATCATAAAC AGATGGAAGC TATACGACGA
    GAACGTGAAG AGAGATATGC TTCTTGACAA AAGTGAGAAG ATGCAAAAAA
    AAAGATTAAG AGTTTACCAT AACACTCAAC AAAATTAANA AATTAAGCCN
    CCNCNCTAGA CATAGCTTAA AATTATATCA CAATTTTAGT GTATTCANAA
    TAGGTTTGAG GGATTGACNC TANAAAATCN GANNCCATGA TCTTCNTGAT
    TTACCAAAAT CAAATCTTTT CATTA
  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22555784 [Map]; Strand: w
      • AT1G61180.2 - [+] show detail - LRR and NB-ARC domains-containing disease resistance protein
        Distance: 1135; Region: intergenic
      • AT1G61190.1 - [+] show detail - LRR and NB-ARC domains-containing disease resistance protein
        Distance: -1818; Region: intergenic
    Flanking Genome Sequence: 12-4717-1 - 5-prime edge
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCTCA ATCTCTGGTT 
    CCTCAATTCG AATTTAGATA ATAATCATAG TTTGATTCCA ACACAAATTT
    CAATCTATTC TTTTGACGGT AGAACATTCT GTTTTCAGAT GACCAAATCC
    TTGACATCCA TACCACTGTA TGTTCAACTT CTCATCTTCT CTAGCNTTCA
    TTCCACACTA TAAAGCTATT GGATATGCAA AAGATTCATG AGGGTTTCCA
    ATTAAACAAT AACTCAAAAT GAAGGTTTCC TTTTCTTCAC TAGTCCCTTG
    AGTCATCAAA TTCTTCATTG CCCTGAAGAA GTCTGGGAAT CTCTCTATAA
    GCCGGCATCA ATTTTTTCAT TAGGCATCTT AAAAACCCCA ATTCTTTGCA
    CCTGGTTTCG TCAATATAAA TATTGGTGTT CATTGTCTAA TCATTCACAT
    CTTTGTCTTC AACAAACAAA GTCTGTAAAA TCTTCTTCCA TCTTCTTTCT
    CTGATCCAGA ATCACTAAAG ACACTACTTC TGAAGCT

AT1G61180.2

Model type
Protein coding
Short Description
LRR and NB-ARC domains-containing disease resistance protein
Computational Description
LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT1G61310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G61190.1

Model type
Protein coding
Short Description
LRR and NB-ARC domains-containing disease resistance protein
Computational Description
LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, apoptosis, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT1G61310.1); Has 22150 Blast hits to 19364 proteins in 791 species: Archae - 16; Bacteria - 2974; Metazoa - 3433; Fungi - 288; Plants - 14918; Viruses - 2; Other Eukaryotes - 519 (source: NCBI BLink).
Link
InterPro Scan - TAIR