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12-4187-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19577989 [Map]; Strand: c
      • AT2G47800.1 - [+] show detail - multidrug resistance-associated protein 4
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 12-4187-1 - 5-prime edge
    CCACCAGCCA TAAGCCTCAG TGCAGTACTG TTTGTAAACT CCTAAGCTAA 
    CCTGTCCGGT TTCCCTTTCT TCTTCTTTGA TGAGCTTCGA GCCATCTTCT
    ACGATGTGAG AACCGAGAAA TGATTTGACA TGCTCATCGT TTAGATCACT
    TAAGTGAGGA GACTCCATTG ACGTTCTCGG AGAGCTTGCA TGGGGAGACG
    TTGGTGTTCT TGGGGATGTG GCGACTGCTG CAGAGTCTGC ACCGGCTTCA
    ACCAGCTCCA TTGACGTCTC ATGTGCAGCC ACAAGTTCCC CAAAATCCAA
    TCCGGAGCTG ACTAATTCGT CATATTTTCC TGATTCAACA ATCTTTCCAT
    CCCGCATCAC CTGAATATTC TATCTCGTAA GAACAAGTTC TAGTTTTTTT
    ATTTTACGAA CATAAATCTA TTAATGATTT GTATACCAAG ATGCAATCCA
    CGTTGTGCAA GAAATCCACT TGATGGGTAA CGAGTAATAC GGTCTTGCCT
    TTCAGAGCTC CTCTTACACA TTTCTGTAAA AACATCACAA TAACAAGAAT
    CAACTTCTGT TGCATTTTAA AGGGGGGAAT ATAACATCAA GAGTTTTTTT
    CTGTCCCTTG CTACCTTGAA TATATCTGAA CCGGTNTGAG CATNCACTGC
    GCTAAAACAT CGTCNAGCAA GTTACATCGC ATTCCTGATA NACAGCACGT
    GCNANCTGTA TACGTTGCTT CTGCCCT
  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19578105 [Map]; Strand: c
      • AT2G47800.1 - [+] show detail - multidrug resistance-associated protein 4
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 12-4187-1 - 3-prime edge
    GCTGGTGGGG AATTGTGCTT GTTCTGTTCT TCTCTCTGAC GTGGCAGGGA 
    TCTCTAATGG CCAGCGATTA CTGGCTTGCA TACGAAACAT CAGCCAAAAA
    TGCAATATCA TTTGATGCTT CCGTTTTCAT TCTCGGATAT GTAATTATTG
    CACNTTGTTT CCATCGTTTT GGTGAGCATC CGGTCATATT ACGTCACCCA
    CTTGGGACTC AAGACGGCTC AGATCTTTTT CCGACAGATT CTTAATAGTA
    TCTTACACGC TCCCATGTCA TTCTTTGACA CCACGCCATC GGGAAGAATT

AT2G47800.1

Model type
Protein coding
Short Description
multidrug resistance-associated protein 4
Curator Summary
Encodes a plasma membrane localized ATPase transporter involved in multidrug transport. The expression of this gene is upregulated by herbicide safeners such as benoxacor, fluxofenim and fenclorim.
Computational Description
multidrug resistance-associated protein 4 (MRP4); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, folic acid transporter activity; INVOLVED IN: response to water deprivation, drug transmembrane transport, response to wounding, response to nematode, stomatal movement; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 10 (TAIR:AT3G62700.1); Has 714857 Blast hits to 368077 proteins in 3991 species: Archae - 12925; Bacteria - 579268; Metazoa - 12980; Fungi - 8565; Plants - 6599; Viruses - 19; Other Eukaryotes - 94501 (source: NCBI BLink).
Link
InterPro Scan - TAIR