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12-4108-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17604182 [Map]; Strand: c
      • AT4G37445.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family pr...
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 12-4108-1 - 5-prime edge 
    GNGATAAACT AACAAAATCG GCTACGGTNA CCATNTTAGC CNTTGTCTCT 
    GCCAAACTCT CTAGACGAAT GNATTTGANA TAATGCTTTA ACTAAGCATT 
    CTTTCTTGTC CNAACANAAA AAACTTAGCN CCGACNANAT TAANACATGA 
    TTGACTGATA ATATAAAATA GAGAAAAATA TATACACTCT AGATTATAGA 
    AGTTAAAGTT CAAAAGTTGA TTTAGAGTCA CAAATACATA AACTTCATGT 
    AGTTTGAATA TATTGTTGAC ATGAAGAATC AAAACACAGC CACTATAAAT 
    ATTTCTTTGT ACTTTAAAGG CTTAAGAGTT AAGAATATCT TAGAATGAAC 
    AATTTTTACT TTTTAACACA AGATCCGATT GGTTTCTTGA AAGTTTCCAA 
    ACCTTCTTCA GGATCTTCTT CGTAACCCGG CAGAGCCTGA CCTTCGTTTT 
    CCTCGCTTTC TCTTCCTGTT GGAAAACCTA GAAGCCATCA CAGCATTAGA 
    CTTTGGCTTC TCTCTTGAAA CCCGACGCCT CTTTGGGTTA CTCTCTTCCT 
    TCGTAATGAT TTCACGATTG CGCGGNGTTC TTTTCCTTAC CTGCATTGTG 
    TTANAAAGGC ATATGAGACC AAAAGGGTTT AGCAAAGTTA CACTGAGTTA 
    GCGGAAAACT TACAGGTCTN GATGGACCTT CCTCAATTGA AGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17592322 [Map]; Strand: w
      • AT4G37409.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (CDS)
      • AT4G37410.1 - [+] show detail - cytochrome P450, family 81, subfamily F, polypeptide 4
        Distance: 0; Region: exon2 (CDS)
      • AT4G37420.1 - [+] show detail - Domain of unknown function (DUF23)
        Distance: -801; Region: promoter
    Flanking Genome Sequence: 12-4108-1 - 3-prime edge 
    GGCACAAGAA CCGGCGCTGC TGGATGTAGC CGGAGTGTCT CGGATACTAC 
    GTTTTGGAGG TAAGGAAGGT TTGCTATGTC TGATTCTTCG ATCAAACGGT 
    CTTGTCCGAT TATCTCGTCG ATCTCTAATT TTACTTTGTC CAAAACTTTT 
    GGGTGGTTCA ACAAACTCGC CATCGCCCAC TCTATTGTCA AAGCGGAGGT 
    CTCTGATGAG GCAACCATTA TACCCTGTTT CATGTATCAT AAGTGAGAAA 
    ACAGAGGATT TTAAAACGTG ATTCATGCTA GTCTCACATA CACGTACAAA 
    TTTCATTAAA TATCATAGAT TTGTTTAACT GCTCCAAACG AATACCCTTA 
    AAACTATACT AAAACATTGT ATCTGAAATT TGAAATAATA GTGGAAATAA 
    CTTATCTTTT CAACCCAAAT AAACCAGACC TAAAATCGAG TGCATAAAAA 
    AAAAAANCAA AAANCCATTT AAAACCNCAC CTTTTNTAAA AATNTTTGTN 
    TANCTAGAAA ANNTAATTTT NTNTTTTAAA AAATCCTTAA AAACANAACN 
    NCCTTTGNAC CCAAAGGTTT NGNATANAAA NGANGTGGCT GNCNATTNTN 
    TNGAAGGGCC CNNNNTTTNA AAAAAANTAA AAANGTTTTN GATNCNTNCC 
    NANCNTNAAC CCTTTNAAAN TAATNNAANN GNANNCCTAN GGGNNNNCCC 
    NNTNCAAAAA AAANANGNNT TANCNNTNNN GTTNC

AT4G37409.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G37410.1

Model type
Protein coding
Short Description
cytochrome P450, family 81, subfamily F, polypeptide 4
Curator Summary
member of CYP81F
Computational Description
"cytochrome P450, family 81, subfamily F, polypeptide 4" (CYP81F4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily F, polypeptide 3 (TAIR:AT4G37400.1); Has 35936 Blast hits to 35767 proteins in 1827 species: Archae - 66; Bacteria - 5738; Metazoa - 11729; Fungi - 7404; Plants - 9478; Viruses - 6; Other Eukaryotes - 1515 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G37420.1

Model type
Protein coding
Short Description
Domain of unknown function (DUF23)
Computational Description
Domain of unknown function (DUF23); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF23 (InterPro:IPR008166); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF23) (TAIR:AT5G40720.1); Has 241 Blast hits to 241 proteins in 76 species: Archae - 0; Bacteria - 129; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G37445.1

Model type
Protein coding
Computational Description
BEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family protein (TAIR:AT1G64850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR