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Mutant Lines
12-3938-1

12-3938-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 5; Position: 26346701 [Map]; Strand: w
- AT5G65840.1 - [+] show detail - Thioredoxin superfamily protein
  Distance: -619; Region: promoter
- AT5G65850.1 - [+] show detail - F-box and associated interaction domains-containing protein
  Distance: 0; Region: exon1 (CDS)

ATCACTGTCA CTGTTTCGTT CATTTCCTTG CGTTTAAAAC AGATCAAGCC 
ATTGACAGGA CGCGAAATTT TATAGCATAA GGAGAAATTC TTTAGAGAAA 
TGGCGGACGA GTTCTCATAT GGACTTTGAA GCTGAGGAGA CGAGAAGAAG 
AACAAGTTAC CATCTTTTTT GCAGCAGAAT AAGAGTTGCG GTCGATGCAA 
AGATCGGGTC AAGAACAGCT CTGTGAAATC TTGACGGCAA ATTACGGAGA 
TCCAGAGTTT CGACACGCAA CGACATGTCG CTATAGATTT CGCCGGTAAT 
CTCAGGAGTA TCTCGATGAT GATATCAACT GGGATCTGGA CTGACTTTTC 
TGTTTTATTC GGTGAGGTCT TCTTCTCCGT TCTACGCCGG GAGATGGTAA 
GACGATTCTC CGTAACATTT CTCCGCAGTG TTCTCATGGC GGATACGCCG 
ACGGTTAAAA CCCTAGAGAG TGAGAGTTTA TGGGGAAGAC GAACCAATTT 
GGATGAGAAA ATCGAAAGCA ATTTTCGTAA TTTTGTTTTA ATGGACTTGG 
ATTTGAATTG GGCTTTCAAA ATAAATATGG GCTTTAAACT AAAAACGACG 
CCGGATACAT TCTCGGTCCA TTATTCGCCA CGTGTTTAAT TTCTAGATGC 
TCTGGTCTAT TCTTCTCGNT TCTCCATAAN CCCAATTGAG TTTATGATTT 
GGGTTCTGAA TCACCATGGC GATTCTNTTT

AT5G65840.1

Model type: Protein coding
Short Description: Thioredoxin superfamily protein
Computational Description: Thioredoxin superfamily protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT2G37240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G65850.1

Model type: Protein coding
Short Description: F-box and associated interaction domains-containing protein
Computational Description: F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 3 (InterPro:IPR013187), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT2G31470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR