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12-3262-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 349052 [Map]; Strand: c
      • AT4G00820.1 - [+] show detail - IQ-domain 17
        Distance: -64; Region: promoter
    Flanking Genome Sequence: 12-3262-1 - 5-prime edge 
    GATCNCGNNN NGNCNTGTTN NTNGNTTATT AGTTCTNGGA NGNNTTNACG 
    CTTANGAAAA ATNCACACTG GTAAAGCTAC CANGCCCGGG CCGACGACCA 
    CGCAGNGCGC TAAAGNGATG TNCGTATAAN NCANGCANGG NCCGTTATAC 
    ATCATCTANG CGATATATGT AACGGTANCN NGCATTANGN AGGACNTGCA 
    GGTNCTAGAA GATGGGGTTG CTGTTAAATN GAAAGATAGA GTTNTGTTGT 
    TTTGAGAGTN AATTTTAAAC AAATACAATA TAAACTAATT CTATTTCATT 
    ATGCAAAACA ATTCTTCTTT CCCTNGGTTC GATTATGCAA TACTATTTCA 
    TACATNCTAA TTTTTGGGTT TTCTTAAGAT ATGCATGGAT ATNATNCTAC 
    TTATATATAT ACTAGATAAG GCCCGCCTAA ATAGGCGGGN GTAAGATATA 
    AATNTATNCA AANATGTATG GATAATATTN AAAATTTGAA TAGTAAATAG 
    TGATCCACAC TTTGNTTAAT GNTTAAGNNA NAAATTNTNG AATNAAATAA 
    AAGTNNNAAG TC

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 349151 [Map]; Strand: c
      • AT4G00820.1 - [+] show detail - IQ-domain 17
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 12-3262-1 - 3-prime edge 
    CCCTTAAGCA ACCTTCCAAA TTTATTGACA TTTCTGTTTC CCAAGATCCA 
    CCCACCACTC TCCTCTCTCT CTTCCTCATT TCTGCGCAAG AATCTAAACC 
    AAATCTCTCA TCCTCTCTTC TATGTCCCAA AACAGGAACA TAACTACTAC 
    TACTACCATG TCTTGACTCT GTTGAGAATC TTAAATCCTA CCTAACCTCC 
    AATGGGTAAG AAGAGCGGTT CTTCTTCTTC TTGGCTCACT GCCGTGAAAC 
    GAGCTTTCCG ATCTCCCACC AAGAAAGAAC ACAACAACAA TGCTCATGGT 
    AATGAAGTCG ACGAAGATGA ANACAAGGTT CGTATACTTT CTCTAGTCTC 
    GAGATCTTGC TTCTTAATTC TTGTTTTTTT ATTCACATGC TCTGTTTCTT 
    GTTTCTCTGT TTTGTATATT ACTATAATTC ATATCCTCTG TTTCTGCAGA 
    AGAAAGAGAA GAGACGNTGG TTATTTAGAA AATCTACGAA TCATGACTCT 
    CCGATGAGGA TCTCCGGGCG CCNGAAAAGA CGCTCCGGNA NTGGAATTCA 
    CAGGAGACNN CGACGATTAT CANCCCAACC GNNTNTNTCC TTNTGTTACA 
    GAACAGAGGT ACGACGCGNT CTANNCCGCN NGGCCNGCNG NNTCCGCCGC 
    ATCNNGAAAN CTCNANTCCT NCTTNGGAAN ANNAAAGGAN GTNNCCNNAA 
    TNNTTACCNN GAATNTNACG TATTGCNGNN AGAGANANNA TTACGCAGN

AT4G00820.1

Model type
Protein coding
Short Description
IQ-domain 17
Computational Description
IQ-domain 17 (iqd17); CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 18 (TAIR:AT1G01110.2); Has 1332 Blast hits to 1131 proteins in 120 species: Archae - 0; Bacteria - 14; Metazoa - 172; Fungi - 58; Plants - 857; Viruses - 43; Other Eukaryotes - 188 (source: NCBI BLink).
Link
InterPro Scan - TAIR