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12-2884-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 2468427 [Map]; Strand: c
      • AT5G07760.1 - [+] show detail - formin homology 2 domain-containing protein / FH2 domain-containing protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-2884-1 - 3-prime edge 
    CTCCTATGCG TAGAAGAGCA CCACTGCCGC CACCTCCTCC TCCTGCTATG 
    CGTAGAAGAG TACTACCACG TCCACCTCCA CCTCCACCTC CACTTCCGAT 
    GTTTGATGCA GAAGTTCTGT GTTGTTGTTA TCCACCTACT CGTGTGCGTA 
    GAGAAGCGCC ACTGCCACCA CCTCCTCTGA TATTTGTAGG AGCCCCACCT 
    CCAACTTGTG CACTTAAGGG TATAGTGTGT TGTTTTCCAT GTCCATCTAA 
    AAAGAAGTCC TCCCTGAAGC GATTTAACTG GGTTAAAATA ACAAGGGCTT 
    TGCCGGGGAG CTTATGGGAT GAGTTACAGA TACAACAAGT ATGCCACGGC 
    GATATCGAGG ATGAACAGAT TCTCTGGTAA TCCCTTCAAG AAACCGAATT

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 2468311 [Map]; Strand: c
      • AT5G07760.1 - [+] show detail - formin homology 2 domain-containing protein / FH2 domain-containing protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-2884-1 - 5-prime edge 
    CATANGAGGA GGAGGAGGTG GCNGGCAGTG GTGCTCTTCT TCNCATAGGA 
    GGAGGAGGAG GAGGAGGCGG TGGTGGAAGT GGAACTCTTC CACGCATAGG 
    AGGCGACACC ACGGCATCAN CGCCAGAGAT CTCGACAGGG GACATTGGAT 
    CAGGAACCAA ACGGATGATT TAGTANANAG ATTTAATAAC AAACATATTT 
    CTTCACCGAC CTAGATCAAA TAACACTAGT TCATAGCAAA AATACTCANA 
    AAATATTAAC AGAATGATCA ATGGCAGCAC AATTGACTTT GAGAAAAATT 
    TGAACAGTCG ACNGACGAGA CAGAGTATTT GATGTCCATT TTTTTGAATA 
    ATAATTACTA CTGGCATATT AATTGACGAA TT

AT5G07760.1

Model type
Protein coding
Short Description
formin homology 2 domain-containing protein / FH2 domain-containing protein
Computational Description
formin homology 2 domain-containing protein / FH2 domain-containing protein; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; LOCATED IN: chloroplast; EXPRESSED IN: shoot apex; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 protein (TAIR:AT5G07650.1); Has 48311 Blast hits to 23266 proteins in 1185 species: Archae - 68; Bacteria - 7011; Metazoa - 18492; Fungi - 4245; Plants - 10792; Viruses - 1661; Other Eukaryotes - 6042 (source: NCBI BLink).
Link
InterPro Scan - TAIR