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12-2441-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 22507193 [Map]; Strand: c
      • AT5G55560.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 12-2441-1 - 5-prime edge 
    GTCAGGTTGC TTAAGAACCT TAAGAACAGT AACATNATCA CCCTGTNTAA 
    AGTGTGGAGA GACGAGAGAA ACAACACCTT GAACTNCATC ACCGAGATC

AT5G55560.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: with no lysine (K) kinase 3 (TAIR:AT3G48260.1); Has 100897 Blast hits to 100061 proteins in 3189 species: Archae - 71; Bacteria - 9572; Metazoa - 37309; Fungi - 9559; Plants - 27616; Viruses - 356; Other Eukaryotes - 16414 (source: NCBI BLink).
Link
InterPro Scan - TAIR