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12-2326-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23116269 [Map]; Strand: w
      • AT1G62450.1 - [+] show detail - Immunoglobulin E-set superfamily protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 12-2326-1 - 3-prime edge 
    GAAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCTACTGGA 
    TAGTACAAAA GCAATGCTTG GGACGTTTAG TCCTCAAGCT GAGTCTTACC 
    AACATGTAAT GCCTGAAGAA ATGACACCGT CTGGTATGTT TGCTAGAGGA 
    TC

AT1G62450.1

Model type
Protein coding
Short Description
Immunoglobulin E-set superfamily protein
Computational Description
Immunoglobulin E-set superfamily protein; FUNCTIONS IN: Rho GDP-dissociation inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytoplasm; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), RHO protein GDP dissociation inhibitor (InterPro:IPR000406); BEST Arabidopsis thaliana protein match is: Immunoglobulin E-set superfamily protein (TAIR:AT1G12070.1); Has 657 Blast hits to 657 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 323; Fungi - 163; Plants - 122; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).
Link
InterPro Scan - TAIR