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12-1793-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22610755 [Map]; Strand: c
      • AT1G61300.1 - [+] show detail - LRR and NB-ARC domains-containing disease resistance protein
        Distance: -482; Region: promoter
    Flanking Genome Sequence: 12-1793-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT ACATGTGGGT TAGTCATAAG TTGTTCACTA 
    GCTAAAAGCA GAGTCCATGG CTTCTTCTTA TGTTGTTCTC CCTTTCTTCT 
    TGTAATTTGG ATTTTTTTCA TTACTTTTCT TTTGCATTTT TTTCTTTCTC 
    CGGTGTGTTG TTCACTTGGA TTATGTTTTT TTCAATTTAT TTAGTTACAA 
    GAGTTGCTAT CAGAGTGACA AAGGACTTAA ATAGTTCTTT GCTCTGGGAT 
    GGTAAAAGAT ACTAATTTCC AAACATGGAA NAAAGAATTA TTCAATTTTT 
    ACTCTAATAG TAGTCTACAC GAAAATGAAA GAGTTGTCAT TTTGAAATGT 
    CTTTANATGC CATATTATTG CCAGTAACTA ATTTGTATGG ACTTTAGCTA 
    CCAAAAAAAG AAAAGAAAAA TCAAAGTCCT TCATATGGAA AANGGGTGGT 
    CTGAAAATCA GNGACAGCAA NGTCTTTNAT TATCTTCTAT CTTTCTGGGA 
    NAATCTCAAC CCACCCGTAT GGGNGCAAGA NGTTATCTAA AACACTTNTT 
    CATNTTNANC TTTACCTTCG NTGGGGCTTA CTNAACTTTT NNCTCTTTAC 
    ATCAAATNNA TGGGGGGGNG NNNNTCTGNA CCANNTTNTT NGGNGANCAA 
    CCNGNGNNCG TNTTTTTANT NNNNTNTGGG GGANCNCNNC NGNANCNNTT 
    NGGNAGGGAN GAAAAGGCCN CT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22610859 [Map]; Strand: c
      • AT1G61300.1 - [+] show detail - LRR and NB-ARC domains-containing disease resistance protein
        Distance: -586; Region: promoter
    Flanking Genome Sequence: 12-1793-1 - 3-prime edge 
    GAAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCCACA 
    TCACTAAAGA AGAAGAAGAA GCAAAATAAG AAAAAAAAAC ACTTGACAAT 
    TGTGGAACTG AATGAAATTG AGAAATATCC CTAACACCCC ATCTACCTAA 
    TTACCTTATC AATATCTAAA GAAGCATGAA CCTTATTCTT AGGAAAAGAA 
    AAGATTATTA TTTTTTGNGA GATTTGATCA TTAAAACTTA AAAGAGTAGA 
    ATACGGCATC TTTCTTTAAA ATTTGAAAAA TTAACGACNC ATAATCTGAA 
    CATCGAATCT GCAGGCAAAC AGAAGCCAAG CCAGATCATT TATGCNCTCA 
    CGTNTAAACA CGTCTGANAG ACGACTGGTA AAGCATGGAA TTGTCGGATT 
    GTTTAAATTA NACTAGTCCA TTTAGCTTTC CTGCAATCTA TATATCTCCT 
    ANACATGACT ACTTTCGACA TAGAGATGAT GAAGATTCTC CNTACTAGCC 
    AGNGACGATG TATTGAATAG CTTTTCTTGA AAAGCATGAA TATGCAGAGA 
    AGTGATGCAG TTCACCAACC TTTGATCGCC TAAATGTTTG ATCCAAACCT 
    AACTCTGTAG GTATCGTCAT GGTTAGAACT TGTAGATTAT GCTCCAAGGA 
    CCAAGGGCTG CAGCTCCTTC ACTAAGCT

AT1G61300.1

Model type
Protein coding
Short Description
LRR and NB-ARC domains-containing disease resistance protein
Computational Description
LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, apoptosis, defense response; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT1G61310.1); Has 27714 Blast hits to 22073 proteins in 822 species: Archae - 18; Bacteria - 5358; Metazoa - 4578; Fungi - 354; Plants - 16806; Viruses - 2; Other Eukaryotes - 598 (source: NCBI BLink).
Link
InterPro Scan - TAIR