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12-1429-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22555856 [Map]; Strand: c
      • AT1G61180.2 - [+] show detail - LRR and NB-ARC domains-containing disease resistance protein
        Distance: 1207; Region: intergenic
      • AT1G61190.1 - [+] show detail - LRR and NB-ARC domains-containing disease resistance protein
        Distance: -1746; Region: intergenic
    Flanking Genome Sequence: 12-1429-1 - 5-prime edge
    CTNTGATAAA ACTAACAAAA TCGGTTATAC GATAACGGTC GGTACGGGAT 
    TTTCCCATCC TACTTTCATT TGGTCATCTG AAAACAGAAT GTTCTACCGT
    CAAAAGAATA ATATTGAAAT TTGTGTTGGA ATCAAACTAT GATTATTATC
    TAAATTCGAA TTGAGGAACC AGAGATTGAG ACTAGATGGG AAAGTGAAGA
    AGATGGACAA GAGAAGACGT CAGAAGACGA AGCGTCAAAG ATTGAGGGAG
    AAGAAGAAGA CTTTGGTTTT AAGTGTAAAA GGGCTTTTGG GCCACAAATG
    TATTTAAGGC CCAACTAGTA AATGGGTTTA GAGGTTTGCA CAAAAGTTAT
    AACTATGAAA TTTCAGGTAT GTTCAAGGTT TTGNTAANAC AATGTACAAG
    AAAATAAACG TTTCANTTTT CAGCGACNTT TTACAGAAGG TTGTGGTGAA
    TCTTTGNTCA TGCAATCTAC CGATNTAAAG TANAGAGTNN NCNTCTATTA
    GTAACCTTTT CATCGTNTTT GAATGTNNAA NANGAGCACA AACNTTTGGT
    TTTTNGGATG GTTGCNGNGG CTGGCTCCCN NGAGATTCNN TNNNTAACTT
    CTNCGGNNAC ANGAAGGGGG AGGGCANNNN NANANCCTTT NATTTGGNGC
    TTANGGAATA CNCNCNTNTN ACCGAGCNTA GCNGTTACNA NNTTGTTTNT
    NNGGATTNTT ANANCNGNNG NNANCCTCNT NCGNCGAGAA CNGTTNNAGA
    NAGATTTNNN CNNCTNGANC NNNNGNGNTA TAGAGGCNAN NANA
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22555917 [Map]; Strand: c
      • AT1G61180.2 - [+] show detail - LRR and NB-ARC domains-containing disease resistance protein
        Distance: 1268; Region: intergenic
      • AT1G61190.1 - [+] show detail - LRR and NB-ARC domains-containing disease resistance protein
        Distance: -1685; Region: intergenic
    Flanking Genome Sequence: 12-1429-1 - 3-prime edge
    GACATCCATA CCACTGTATG TTCAACTTCT CATCTTCTCT AGCTTCATTC 
    CACACTATAA AGCTATTGGA TATGCAAAAG ATTCATGAGG GTTTCCAATT
    AAACAATAAC TCAAAATGAA GGTTTCCTTT TCTTCACTAG TCCCTTGAGT
    CATCAAATTC TTCATTGCCC TGAAGAAGTC TGGGAATCTC TCTATAAGCC
    GGCATCAATT TTTTCATTAG GCATCTTAAA AACCCCAATT CTTTGCACCT
    GGTTTCGTCA ATATAAATAT TGGTGTTCAT TGTCTAATCA TTCACATCTT
    TGTCTTCAAC AAACAAAGTC TGTAAAATCT TCTTCCATCT TCTTTCTCTG
    ATCCAGAATC ACTAAAGACA CTACTTCTGA AGCT

AT1G61180.2

Model type
Protein coding
Short Description
LRR and NB-ARC domains-containing disease resistance protein
Computational Description
LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT1G61310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G61190.1

Model type
Protein coding
Short Description
LRR and NB-ARC domains-containing disease resistance protein
Computational Description
LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, apoptosis, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT1G61310.1); Has 22150 Blast hits to 19364 proteins in 791 species: Archae - 16; Bacteria - 2974; Metazoa - 3433; Fungi - 288; Plants - 14918; Viruses - 2; Other Eukaryotes - 519 (source: NCBI BLink).
Link
InterPro Scan - TAIR