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12-1010-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23559794 [Map]; Strand: c
      • AT1G63510.1 - [+] show detail - pre-tRNA
        Distance: -536; Region: promoter
      • AT1G63520.1 - [+] show detail - Protein of unknown function (DUF3527)
        Distance: -93; Region: promoter
    Flanking Genome Sequence: 12-1010-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT AATTCTAAGC CAATCATAGA AAGGGTGTGG 
    AAAAAGTAAC AATCAAATAC CAATTGATGG TTTCAGAGTA GTGTTCCTCA 
    AGGATGATAA AAAGAAAACC TTTAATCATA TGCATCATAC AAATTGATGA 
    CCGTTACATT AAAATAGGAA AAGTAAGTAG CTCTCTTTGA ACATGAACAA 
    CAATAAGCCA TGTTAGAACA GATTAGAAAA AAAGATAAAA CTAGCAGAGA 
    AATGCAATTT TGCAATAAAA ATGTTAAATA CATAAAGCTA AAACTCGTTC 
    TTTAACGAAT AATATAAAAT TCATCAAGCT AACAAATTCC AAATCTACAA 
    CAGATGATCA TGTGGCTCCG ACAAAAAGCC CTTGGGGGAA ATAACAAATC 
    ACAATGCTTT CAAAGGAAAA TAGAAATGTT TTTTTTCTTC TCTGTTTTCT 
    GTTTTCTTAA TGGGCTTTTA CAAAAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23559787 [Map]; Strand: c
      • AT1G63510.1 - [+] show detail - pre-tRNA
        Distance: -529; Region: promoter
      • AT1G63520.1 - [+] show detail - Protein of unknown function (DUF3527)
        Distance: -100; Region: promoter
    Flanking Genome Sequence: 12-1010-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TGCTTAGAAT GCAAGTGAAA TATAGCTTTT GTCTTTCTAA ATGATTTCTT 
    ATGTAACTTT TGTCTGTTGC TTTCATTACA TTCACAACTA CTTGATTCCT 
    ATGTCACTTT TGTTGTGTGG CTTTAGATCT GTAAGAGCGT AGGCTAAAAT 
    TTTTGACTTC TCTATCTAGA GTTTGCTATT TTAACTTCTC TCTGTGTAAA 
    AGTTCATAAT CAGTGATAGT TTCCTCAAGA AGTTGAAGTT AGATTTTGCT 
    GTGATTGGTA AGTGATCTTT TCTATATTCA TTTGCATTAT CTGTTTGTTA 
    GCTTATTTGG TATGTTACAG TACTGATACA GGTTCTTGCC TTGAACAAAT 
    CTTTTGCAGA AGTTTTGTCA TTCTCTGATG GTAATAGAGA TTAGTTAATC 
    TATACAAAAG CAGTCAAAAG ATGGCACAGA GTTCTGAAAA TGTTCTTCCT 
    ACTCTACGAG ATTTCTTCGA TTCTAAAAAG GCTGGGGAAG AGGACGAGTT 
    TTTGTTTTAT CGGGCGCTTA ACTCCTCGTG CAAGAAACCT CCAAAACCGG 
    GAAACAAGGC GAAGGAGAGA CATGGTTTCT TCAATCAGGG ATC

AT1G63510.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Cys (anticodon: GCA)
Link
InterPro Scan - TAIR

AT1G63520.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF3527)
Computational Description
Protein of unknown function (DUF3527); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3527 (InterPro:IPR021916); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3527) (TAIR:AT4G11450.1); Has 121 Blast hits to 121 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR